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. 2009 Aug 25;10:266. doi: 10.1186/1471-2105-10-266

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Copyright © 2009 Helt et al; licensee BioMed Central Ltd.

This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/2.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.

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NeoSeq and NeoMap widgets can work in concert. (A) A NeoSeq widget displays sequence as characters. Here, the user has highlighted a section of the sequence. The selected region appears in red. (B) NeoSeq and NeoMap working in concert. Here, a red RectangleGlyph covers the section of the NeoMap corresponding to the section of sequence displayed in the NeoSeq. Click-dragging the RectangleGlyph in the NeoMap scrolls the sequence displayed in the NeoSeq. Likewise, scrolling the NeoSeq moves the RectangleGlyph. In many settings, it is useful to be able to view sequence data in a scrollable window, linked to a map in which annotations and other notations on the sequence appear.