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. 2009 Sep 29;4(9):e7264. doi: 10.1371/journal.pone.0007264

Table 3. Most abundant RNA viruses detected in Lake Needwood.

June November
Species Number of sequences Largest contig virus Number of sequences Largest contig
Acute bee paralysis virus 9 377 Acheta domesticus virus 25 636
Angelonia flower break virus 2 234 Acute bee paralysis virus 38 901
Aphid lethal paralysis virus 72 797 Angelonia flower break virus 5 241
Artichoke mottled crinkle virus 2 215 Aphid lethal paralysis virus 463 1412
Avian encephalomyelitis virus 1559 1271 Artichoke mottled crinkle virus 2 234
Banna Virus 3261 2402 Atlantic cod nervous necrosis virus 2 241
Black queen cell virus 7 340 Atlantic halibut nodavirus 6 813
Cowpea mosaic virus 1912 852 Avian hepatitis E virus 24 1180
Cricket paralysis virus 1071 442 Banna virus 3 241
Cucumber necrosis virus 8 329 Bean leafroll virus 2 135
Drosophila C virus 5996 4475 Bean pod mottle virus 151 2642
Galinsoga mosaic virus 2826 394 Beet black scorch virus 248 578
Grapevine Algerian latent virus 4 338 Blackberry virus Z 18 830
Groundnut rosette virus 3 236 Boolarra virus 4 164
Havel river tombusvirus 4 151 Bovine kobuvirus 5 229
Heterosigma akashiwo RNA virus SOG263 125 1874 Broad bean wilt virus 1 15 955
Himetobi P virus 2140 3119 Carnation Italian ringspot virus 25 450
Homalodisca coagulata virus-1 74 975 Carnation mottle virus 93 899
Human enterovirus 94 52 1269 Carnation ringspot virus 2 178
Human picobirnavirus 115 1174 Cocksfoot mottle virus 47 645
Israel acute paralysis virus of bees 940 2228 Cowpea mosaic virus 440 3645
Maize chlorotic mottle virus 833 261 Cowpea mottle virus 13 349
Oat chlorotic stunt virus 3 166 Cricket paralysis virus 4060 2803
Olive latent virus 1 36 1111 Cucumber Bulgarian latent virus 35 481
Pariacato virus 446 764 Cucumber leaf spot virus 79 1164
Pea stem necrosis virus 4 240 Cucumber necrosis virus 41 718
Pear latent virus 9 288 Cymbidium ringspot virus 5 238
Pelargonium line pattern virus 2 483 Dendrolimus punctatus tetravirus 51 843
Pieris rapae virus 1762 1570 Dicentrarchus labrax nervous necrosis virus 5 730
Rhizosolenia setigera RNA virus 5937 2805 Drosophila C virus 3447 1765
Rhopalosiphum padi virus 955 1839 Echovirus 23 strain Williamson 6 402
Ryegrass mottle virus 2 241 Enterobacterio phage MS2 3 241
Schizochytrium single-stranded RNA virus 661 2036 Euprosterna elaeasa virus 2 224
Sclerophthora macrospora virus A 11 337 Flock house virus 2 229
Sclerophthora macrospora virus B 145 1109 Fragaria chiloensis latent virus 5 583
Solenopsis invicta virus 1 24 689 Galinsoga mosaic virus 187 1941
Tobacco necrosis virus D 1 128 Grapevine Algerian latent virus 9 178
Tomato bushy stunt virus 3 170 Helicoverpa armigera stunt virus 3 219
Triatoma virus 1829 590 Hepatitis E virus 133 3258
unidentified chinese clam virus 16–50 1660 272 Heterosigma akashiwo RNA virus SOG263 20 383
Vicia cryptic virus 9 217 Hibiscus chlorotic ringspot virus 1984 4124
Himetobi P virus 76 883
Homalodisca coagulata virus-1 263 1606
Infectious flacherie virus 462 4424
Influenza A virus (AternAustralia13632004 (H2N5) 4 230
Israel acute paralysis virus of bees 2202 1982
Japanese iris necrotic ring virus 40 952
Kashmir bee virus 655 4407
Leek white stripe virus 165 1837
Lisianthus necrosis virus 37 624
Maize chlorotic dwarf virus 28 546
Maize chlorotic mottle virus 1874 1074
Maize necrotic streak virus 2 134
Maize white line mosaic satellite virus 74 916
Maize white line mosaic virus 2 177
Melon necrotic spot virus 18 401
Nodamura virus 5 354
Nootka lupine vein-clearing virus 6 241
Nora virus 6 193
Oat chlorotic stunt virus 513 703
Odontoglossum ringspot virus 95 1907
Olive latent virus 1 1942 1530
Panicum mosaic virus 4 151
Pariacato virus 35 723
Pea enation mosaic virus-2 33 695
Pea stem necrosis virus 74 1109
Pear latent virus 18 397
Pelargonium chlorotic ring pattern virus 2 241
Pelargonium line pattern virus 57 1058
Pelargonium necrotic spot virus 25 863
Perina nuda virus 3 104
Physalis mottle virus 7 765
Pieris rapae virus 8 466
Plautia stali intestine virus 28 441
Pothos latent virus 69 925
Redspotted grouper nervous necrosis virus 4 709
Rhizosolenia setigera RNA virus 6856 3726
Rhopalosiphum padi virus 12 402
Ribgrass mosaic virus 4 240
Rice tungro spherical virus 28 1179
Rice yellow mottle virus 3 687
Ryegrass mottle virus 275 2497
Sacbrood virus 3 229
Saguaro cactus virus 4 339
Schizochytrium single-stranded RNA virus 34 1161
Sclerophthora macrospora virus A 1238 3563
Sclerophthora macrospora virus B 1960 2335
Sesame necrotic mosaic virus 102 1049
Solenopsis invicta virus 1 26 650
Solenopsis invicta virus 2 5 397
Southern bean mosaic virus 3 217
Sowbane mosaic virus 5 720
Soybean dwarf virus 5 124
Striped Jack nervous necrosis virus 3 634
Taura syndrome virus 147 1929
Tobacco bushy top virus 16 700
Tobacco mild green mosaic virus 21 583
Tobacco mosaic virus 13 422
Tobacco mottle virus 5 227
Tobacco necrosis satellite virus 43 874
Tobacco necrosis virus A 313 1764
Tobacco necrosis virus D 39 720
Tomato bushy stunt virus 15 711
Tomato white ringspot virus 5 241
Triatoma virus 108 1028
Tulip virus X 2 242
Turnip vein-clearing virus 103 1594
unidentified chinese clam virus 16–50 291 332