TABLE 3.
Eloop-tmpl | Eloop -loop | Eloop | Fsum | Etotal | |||||||
---|---|---|---|---|---|---|---|---|---|---|---|
80 waters ρwater= 0.0139 ns= 40 | |||||||||||
Free | −71 | −41 | −63 | 28 | −112 | −35 | −147 | −1247 | |||
Bound | −141 | −7 | −47 | 15 | −148 | −32 | −180 | −1256 | |||
Δ1 | 70 (1) | −34 (2) | −16 (1) | 13 (1) | 36 (2) | −3 (1) | 33 (3) | 9 (3) | |||
100 waters ρwater= 0.0174 ns=40 | |||||||||||
Free | −89 | −49 | −41 | 26 | −138 | −15 | −153 | −1469 | |||
Bound | −142 | −6 | −47 | 21 | −148 | −26 | −172 | −1460 | |||
Δ1 | 53 (1) | −43 (1) | 6 (1) | 5 (1) | 10 (1) | 11 (1) | 21 (1) | −9 (5) | |||
120 waters ρwater= 0.0209 ns=40 | |||||||||||
Free | −89 | −40 | −58 | 61 | −129 | 3 | −126 | −1668 | |||
Bound | −144 | −7 | −52 | 29 | −151 | −23 | −174 | −1693 | |||
Δ1 | 55 (1) | −33 (1) | −6 (1) | 32 (1) | 22 (1) | 26 (1) | 48 (1) | 25 (1) | |||
140 waters ρwater= 0.0244 ns=40 | |||||||||||
Free | −86 | −43 | −71 | +90 | −129 | 19 | −110 | −1884 | |||
Bound | −143 | −6 | −50 | 75 (4) | −149 | 25 | −124 | −1879 | |||
Δ1 | 57 (2) | −37 (3) | −21 (1) | 15 (1) | 20 (1) | −6 (1) | 14 (1) | −5 (1) | |||
160 waters ρwater= 0.0278 ns=40 double integration | |||||||||||
Free | −91 | −20 | −81 | 84 | −111 | 3 | −108 | −2075 | |||
Bound | −146 | −10 | −50 | 84 | −156 | 34 | −122 | −2087 | |||
Δ2 | 54 (1) | −9 (1) | −31 (1) | 0 (2) | 45 (1) | −31 (1) | 14 (2) | 12 (3) | |||
180 waters ρwater= 0.0313 ns=80 double integrations | |||||||||||
Free | −82 | −21(0) | −90 | +94 | −103 | 4 | −99 | −2285 | |||
Bound | −131 | −5(4) | −49 | 106 | −136 | 57 | −79 | −2274 | |||
Δ3 | 48 (1) | −16 (1) | −41 (1) | −12 (1) | 33 (1) | −53 (1) | −20 (2) | −11 (1) | |||
200 waters ρwater= 0.0348 ns=40 double integration | |||||||||||
Free | −68 | −33 | −106 | 122 | −101 | 16 | −85 | −2478 | |||
Bound | −136 | −2 | −60 | 126 | −133 | 66 | −67 | −2452 | |||
Δ2 | 68 (1) | −31 (1) | −46 (1) | −4 (1) | 32 (1) | −50 (2) | −18 (2) | −33 (8) | |||
220 waters ρwater= 0.0383 ns=40 | |||||||||||
Free | −78 | −42 | −76 | +137 | −120 | 61 | −59 | −2584 | |||
Bound | −134 | −3 | −62 | +143 | −137 | 81 | −56 | −2571 | |||
Δ1 | 56 (1) | −39 (1) | −14 (1) | −6 (1) | 17 (1) | −20 (1) | −3 (2) | −13 (3) |
For explanations, see Table 2. The errors in Δ appear in parenthesis, e.g., −46 (2) =−46±2; thus, the 2 kcal/mol is the difference between the value which appears in the table and the value obtained for a smaller sample size, ns: 1for ns=20; 2 the largest difference obtained with ns=20 or ns=40 with single integration; 3for ns=40 with single integration.