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. 2009 Jul 17;75(18):5809–5813. doi: 10.1128/AEM.00206-09

TABLE 3.

Validation of genus and species classification by FT-IR, given as probability for correct identification of strains (repeated determinations)a

Organism nref All strains
External strains
nval Identification (%)
nval Identification (%)b
Correct Incorrect Correct Incorrect
Yersinia (genus level) 32 183 92.1 1.3 151 91.5 1.5
Yersinia (species level) 101 183 77.9 2.0
    Y. enterocolitica 48 113 79.9 2.6 65 78.7 3.9
    Y. ruckeri 6 12 73.7 1.6
    Y. pseudotuberculosis 5 11 84.3 1.4
    Y. bercovieri 11 11 96.7 0
    Y. rohdei 2 2 100 0
    Y. intermedia I 19 19 45.0 1.3
    Y. kristensenii/frederiksenii/intermedia IIc 12 14 89.0 1.3
a

nref, number of isolates used for reference; nval, number of isolates used for validation. For internal validation, all spectra which had not been included in the reference data set were used. The probability of obtaining uncertain results during repeated determinations is given by the residual to 100%.

b

For genus-level determination and for identification of Y. enterocolitica, an external validation was applied using all isolates not included in the reference.

c

As determined by API 20E.