TABLE 1.
BLAST analysis of p200 ChIP complexes
| Gene | CHRa | Identity (%) | Location | Description | No. of Alu-Sx elements in 5-kb promoter region | Accession no. |
|---|---|---|---|---|---|---|
| SEMA6D | 15 | 99.0 | 5′ upstream | Sema domain, transmembrane domain, and cytoplasmic domain, (semaphorin) 6D | Promoter > 5 kb | NM_153619 |
| ODZ3 | x | 99.3 | 5′ upstream | Odd Oz/ten-m homolog 3 | 2 | NM_001080477 |
| DOT1L | 19 | 99.7 | Intron 23 | DOT1-like, histone methyltransferaseH3 | 7 | NM_032482 |
| USP8 | 15 | 99.3 | 5′ upstream | Ubiquitin-specific peptidase 8 | 6 | NM_005154 |
| CHRNA7 | 15 | 99.0 | 5′ upstream | Cholinergic receptor, nicotinic, alpha 7 | 1 | NM_000746 |
| RYR3 | 15 | 98.8 | 5′ upstream | Ryanodine receptor 3 | 1 | NM_001036 |
| CDYL | 6 | 100 | 5′ upstream | Chromodomain Y-like protein | 2 | NM_004824 |
| AMD1 | 6 | 97.0 | Intron 1 | Adenosylmethionine decarboxylase 1 | 2 | NM_001634 |
| USP5 | 12 | 99.2 | Intron 19 | Ubiquitin-specific peptidase 5 | 1 | NM_003481 |
| WARS | 14 | 98.0 | Intron 5 | Tryptophanyl-tRNA synthetase | 6 | NM_004184 |
| DISP1 | 1 | 100.0 | Intron 3 | Dispatched A | Intron only | NM_032890 |
| WDR89 | 14 | 100.0 | Intron 2 | WD repeat domain 89 | 3 | NM_080666 |
| DOCK7 | 1 | 100.0 | Intron 18 | Dedicator of cytokinesis 7 | 1 | NM_033407 |
| MMACHC | 1 | 97.4 | Intron 1 | Methylmalonic aciduria and homocystinuria-type C protein | 1 | NM_015506 |
a
CHR, chromosome.