Table 3.
Relationship of SNPs of Genome-Wide Significance to Fibrinogen with CRP Levels and Relationship of SNPs of Genome-Wide Significance to CRP with Fibrinogen Levels
Nearest Candidate Gene(s) | SNPs | Association with Fibrinogen | Association with CRP* | ||
---|---|---|---|---|---|
Beta-Coefficient | P-value | Beta-Coefficient | P-value | ||
Genes/SNPs Associated with Fibrinogen at Genome-wide Significance | |||||
IL6R | rs8192284 | -5.299 | 1.80×10-11 | -0.109 | 1.04×10-22 |
CPS1 | rs7422339 | -4.843 | 8.82×10-09 | 0.004 | 0.750 |
FGB, FGA, FGG | rs6056 | 12.940 | 8.04×10-39 | -0.002 | 0.867 |
SLC22A5, SLC22A4, IRF1 | rs1016988 | -6.839 | 1.24×10-12 | -0.022 | 0.112 |
CD300LF, SLC9A3R1, NAT9 | rs10512597 | -6.450 | 7.72×10-11 | -0.046 | 9.85×10-04 |
Genes/SNPs Associated with CRP* at Genome-wide Significance | |||||
IL6R | rs8192284 | -5.299 | 1.80×10-11 | -0.109 | 1.04×10-22 |
CRP | rs3091244 | -0.111 | 0.890 | 0.224 | 7.10×10-88 |
LEPR | rs1892534 | -2.067 | 0.009 | -0.148 | 2.24×10-40 |
GCKR | rs780094 | 2.410 | 0.002 | 0.131 | 2.74×10-32 |
Gene Desert | rs10778213 | 1.998 | 0.010 | -0.089 | 3.75×10-16 |
HNF1A | rs7310409 | -0.587 | 0.462 | -0.176 | 9.61×10-56 |
APOE | rs769449 | -1.337 | 0.251 | -0.270 | 5.98×10-57 |
CRP was log-transformed
Abbreviations
CRP = C-reactive protein
LEPR = leptin receptor protein
GCKR = glucokinase regulatory protein
HNF1 = hepatic nuclear factor-1 (transcription factor 1, hepatic [TCF1])
APOE = apolipoprotein E