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. Author manuscript; available in PMC: 2009 Sep 23.
Published in final edited form as: J Pain. 2009 May;10(5):527–533. doi: 10.1016/j.jpain.2008.11.012

Table 2.

Nine Genotypes, Possible Diplotypes Within Each Genotype, and Their Frequencies at Two SNPs

Genotype
XbaI PVUII Possible Diplotype Diplotype frequency Expected Relative Frequency within each genotype Observed Frequency Risk Type
GG CC [GC][GC] P[GC][GC] = P2[GC] 1 10 [GC][GC]*
GG CT [GC][GT] P[GC][GT] = 2P[GT]P[GC] 1 29
[GC][GC¯]
GG TT [GT][GT] P[GT][GT] = P2[GT] 1 16
[GC¯][GC¯]
GA CC [GC][AC] P[GC][AC] = 2P[GC]P[AC] 1 34
[GC][GC¯]
GA CT [GC][AT] P[GC][AT] = 2P[GC]P[AT] π
[GC][GC¯]
[GT][AC] P[GT][AC] = 2P[GT]P[AC] 1−π 173
[GC¯][GC¯]
GA TT [AT][GT] P[GT][AT] = 2P[GT]P[AT] 1 18
[GC¯][GC¯]
AA CC [AC][AC] P[AC][AC] = P2[AC] 1 10
[GC¯][GC¯]
AA CT [AC][AT] P[AC][AT] = 2P[AC]P[AT] 1 8
[GC¯][GC¯]
AA TT [AT][AT] P[AT][AT] = P2[AT] 1 2
[GC¯][GC¯]
*

[GC][GC], no presence of risk type

[GC][GC¯], presence of only 1 risk type

[GC¯][GC¯], double presence of risk type.