Appendix.
Locus | Repeat composition | Forward primer sequence | Reverse primer sequence | PCR product length (bp) |
---|---|---|---|---|
(AT)15 | aatttggagattagctggaat | ccatgttgatgataagcacaa | 144–148 | |
AT0101 | (AT)14 | ttgtcaaaatgcactcttcattatc | ctagttacccgccaatccaa | 220–222 |
AT0102 | (AT)16 | cgtgatattgatcactcgtcaga | ggcacatccgttttgaagat | 182–184 |
AT0103 | (TA)16 | tcaattctacaagaaaaatgctga | gcccatataatgtgcatcacg | 121–127 |
AT0104 | (AT)10 | aacataaagggcgtgaggtg | tttaaagtaagcattttcattgcat | 237 |
AT0201 | (AT)13 | gcaaaactgcctaaataacacc | tcgtttgaggtcaatttttgaa | 181–185 |
AT0202 | (AT)14 | gggttagacaattcaaatgttttt | aaacccaagatcaatattttctttaca | 180–184 |
AT0203 | (AT)14 | tgcgatatattatgcacggatt | caaaacgtgttcgattttggt | 161 |
AT0204 | (AT)14 | ttctcaaagtctccaagtatggtg | aaagcttttgttaggcaagca | 215–217 |
AT0301 | (AT)16 | ttggcctaacctaaccatcaa | ctaaaaacaacaatagaagccaca | 213–217 |
AT0302 | (AT)12 | catcaatatgatatgttcctattttca | aagccgtattgacaggagaa | 192–196 |
AT0303 | (AT)12 | ccatgatttcattcacaacca | ttccatgatccaccacttctc | 211 |
AT0304 | (AT)17 | tgaaatgaacagaagaagaaacca | agaagcaccatgattcaaaga | 165 |
AT0402 | (AT)28 | acatggttttgctcccaagt | tgcagcccagaactttctct | 198–204 |
AT0403 | (AT)23 | ttttcccgacagctcgtagt | tctcacatggttagggaaacaa | 182–190 |
AT0404 | (AT)8 | ggtctctttagtctttaagtttgtcca | tgccgttatagcggtcattt | 178 |
AT0501 | (AT)15 | aagaaagtgctgaatgttgatga | tgcataagccaaatgaattttt | 168–172 |
AT0502 | (AT)15 | tgtacgtaaaatataagaaggacgatt | gaatgaaccatttcgcacct | 198–200 |
AT0503 | (AT)12 | atcctacccgaattccgaac | ccatgccaaaatttacacga | 229 |
AT0504 | (AT)23 | tttggatcttcaacaaatgctc | ttacccaaaccaagcaaagc | 257–261 |
CA0101 | (AC)14 | acgaggacttcgcctgtcta | cggaaacacagtactgcttga | 180 |
CA0102 | (TG)10 | ttatgagactggtcgactgga | catgtcgagaccgatttcaag | 164 |
CA0103 | (TG)12 | tcacatcaaggtttgctcca | cgtgtttccttatccggtgt | 202 |
CA0104 | (TG)10 | gacaaacaaaatccgttctgg | tatcgtgacgctctcacctg | 202–204 |
CA0201 | (TG)10 | ccatgcatgtaaataatgaatagtga | ttgatgcttgtttgttttcca | 190 |
CA0202 | (TG)12 | aatactgcttcggtggcatc | tggaaatcccgtgttaccat | 222 |
CA0301 | (TG)10 | tccagcatttctttgccttt | aagctgaaaaatttcccttaatgt | 224 |
CA0302 | (TG)12 | aatggctggccatcaaact | ttgggtgtcattctcctcgt | 263 |
CA0401 | (CA)12 | atcacatacgccgtcctaca | tgtagctccgaatcctactcc | 174 |
CA0501 | (TG)10 | catcgtttctcaattcgatgg | gggtgcacagggatttaaca | 263 |
CA0502 | (TG)13 | ttcccttcaccgaacttgag | aaagccttcttcaatcaaagc | 165 |
CA0503 | (TG)10 | tttttctacacattttctctcaatttc | atgaactatctttgatccaatgc | 166 |
CA0504 | (TG)13 | aaaacgggaaaggtggaagt | gcctcgtgaggagtttggta | 233 |
CA72 | (CA)18 | aatcccagtaaccaaacacaca | cccagtctaaccacgaccac | 168 |
CT.nga1145 | (GA)14 | ccttcacatccaaaacccac | gcacatacccacaaccagaa | 229 |
CT.nga172 | (GA)29 | agctgcttccttatagcgtcc | catccgaatgccattgttc | 175 |
CT.nga225 | (CT)18 | gaaatccaaatcccagagagg | tctccccactagttttgtgtcc | 134–136 |
CT.nga32 | (GA)13 | ggagactttttgagattggcc | ccaaaacaattagctcccca | 275 |
CT.nga59 | (CT)19 | gcatctgtgttcactcgcc | ttaatacattagcccagacccg | 124 |
CT0101 | (CT)11 | cagagacgaaagaggtgatgg | tcgaagagagagaaaatcccttt | 169 |
CT0102 | (AG)15 | agacctccacctccaagacc | tcttccacgatccttatcgaa | 228 |
CT0103 | (CT)10 | caacactgtgaaaccaaaaacc | ccaacctcatgaaacaaagga | 198 |
CT0104 | (AG)14 | ttgttcggctctgcttcttt | ttgccctccaaacatggtat | 211–213 |
CT0201 | (AG)12 | tgtgcgtgtaattttgttgct | tcagaaacgtgggtgtgtgt | 223 |
CT0301 | (AG)12 | gggctctgtgttttgaggaa | ggatttccgcaatcatcatc | 230 |
CT0302 | (CT)12 | gcactcgcaagtgtgaacat | tcgtttgcttcttctgtttgtc | 266 |
CT0303 | (CT)15 | caatggtgatgtggcattgt | aaagaagaggagcagcgtgt | 193 |
CT0304 | (AG)13 | caatttccgatggaggaaga | cccttttctcaatgcccttt | 167–169 |
CT0401 | (AG)27 | aacaatgaggcgtatgtgagg | tgaaacttttgttgtttgggttt | 193–197 |
CT0402 | (AG)25 | gccgctgacacttgtcacta | tcagatttccttggctttcg | 229–231 |
CT0403 | (CT)12 | cttaggggccagctttctct | ccgaggcgtattttgtcatc | 215 |
CT0501 | (AG)19 | gaagaagcgtgggatatgga | ggcctcacatgaaaccctaa | 204–206 |
CT0502 | (CT)22 | cccgactcggaattcactaa | ctggcccaaccactactcat | 218 |
CT0503 | (AG)15 | cttccatttttggcttagca | tgctttttcctcggtaatgaa | 212–214 |