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. Author manuscript; available in PMC: 2010 Apr 15.
Published in final edited form as: J Am Chem Soc. 2009 Apr 15;131(14):5257–5263. doi: 10.1021/ja809419f

Table 1.

143 RNAs: selected loop and 3′ -terminal sequences.

Triplet NGU, N Quad N′NGY Five/six nucleotide loops 3′ -terminal nucleotides
N′ N Y N3' N3'-1 N3'-2 N3'-3 N3'-4
U 44 19 18 26 ACUGU, CACGU 136 (95%) 21 30 44 36
C 9 2 12 13 ACCGU 2 83 (58%) 33 41 44
A 6 14 8 0 GCAAGU 2 20 29 30 27
G 2 4 1 0 GCUCGU 3 19 51 28 36
Tot 61 (43%) 39 (27%) 5 (3.5%) 143 (100%)