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. Author manuscript; available in PMC: 2009 Sep 25.
Published in final edited form as: Ann Stat. 2009 Jan 1;37(5A):2178–2201. doi: 10.1214/08-aos646

Table 1.

Size and Power of Screen and Clean Procedures using Lasso, Stepwise and Marginal regression for the screening step. For all procedures α = 0.05. For p = 100, δ = 0.5 and for p = 1000, δ = 1.5. Reported power is πav. The top 8 rows of simulations were conducted using three stages as described in section 4, with a third of the data used for each stage. The bottom 8 rows of simulations were conducted splitting the data in half, using the first portion with leave-one-out cross validation for stages 1 and 2 and the second portion for cleaning.

Splits n p model Lasso Size Step Marg Lasso Power Step Marg
2 100 100 A 0.005 0.001 0.004 0.00 0.00 0.00
2 100 100 B 0.01 0.02 0.03 0.62 0.62 0.31
2 100 100 C 0.001 0.01 0.01 0.77 0.57 0.21
2 100 10 D 0.291 0.283 0.143 0.08 0.08 0.04

2 100 1000 A 0.001 0.002 0.010 0.00 0.00 0.00
2 100 1000 B 0.002 0.020 0.010 0.17 0.09 0.11
2 100 1000 C 0.02 0.14 0.01 0.27 0.15 0.11
2 1000 10 D 0.291 0.283 0.143 0.08 0.08 0.04

3 100 100 A 0.040 0.050 0.030 0.00 0.00 0.00
3 100 100 B 0.02 0.01 0.02 0.91 0.90 0.56
3 100 100 C 0.03 0.04 0.03 0.91 0.88 0.41
3 100 10 D 0.382 0.343 0.183 0.16 0.18 0.09

3 100 1000 A 0.035 0.045 0.040 0.00 0.00 0.00
3 100 1000 B 0.045 0.020 0.035 0.57 0.66 0.29
3 100 1000 C 0.06 0.070 0.020 0.74 0.65 0.19
3 1000 10 D 0.481 0.486 0.187 0.17 0.17 0.13