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. Author manuscript; available in PMC: 2010 Aug 1.
Published in final edited form as: J Comput Chem. 2009 Aug;30(11):1701–1711. doi: 10.1002/jcc.21268

Table 5.

Ligand solvation free energies in bulk water from QM ab initio methods with continuum solvation, MM-PMPB/SA and explicit solvent FEP simulations using the polarizable force field. ΔAsol is the total ligand solvation free energies (kcal/mol) in bulk water including the polar Asol,polar) and the non-polar components.

ΔAsolMP2
1
ΔAsol,polarMP2
1
ΔAsolDFT
2
ΔAsol,polarDFT
2
ΔAsolPMPB
3
ΔAsol,polarPMPB
3
ΔAsolFEP
A −59.3 −64.6 −57.9 −59.1 −54.2 −56.8 −45.8
B −55.8 −60.8 −57.1 −57.6 −55.6 −58.1 −71.7
C −62.6 −67.6 −62.1 −62.6 −58.3 −60.9 −56.4
D −58.6 −64.1 −56.0 −57.1 −53.4 −56.2 −47.1
E −69.7 −75.4 −64.1 −65.1 −57.6 −60.1 −66.8
1

From MP2/6-31+G* with PCM implicit solvent model.

2

From B3LYP/6-31G* with PCM model.

3

MM-PMPB/SA approach.