TABLE 4.
Genes upregulated by rbfa
| ORF | Fold change in:
|
Gene | Description | |
|---|---|---|---|---|
| rbfΔ vs wt | rbf++ vs wt | |||
| SACOL2641 | 3.7 | gpxA | Glutathione peroxidase | |
| SACOL2689 | 6.1 | icaA | Intercellular adhesion protein A | |
| SACOL2691 | 4.5 | icaB | Intercellular adhesion protein B | |
| SACOL2690 | 5.9 | icaD | Intercellular adhesion protein D | |
| SACOL0725 | 5.4 | 14.0 | rbf | Transcriptional regulator, AraC family |
| SACOL0726 | 11.5 | sarX | Transcription factor | |
| 7.1 | Intergenic region upstream of rbf | |||
| SACOL2198 | 2.1 | aldC | α-Acetolactate decarboxylase | |
| SACOL1351 | 2.2 | cls1 | Cardiolipin synthetase | |
| SACOL0357 | 2.2 | dut | Prophage L54a, deoxyuridine 5-triphosphate nucleotidohydrolase | |
| SACOL0600 | 2.1 | ilvE | Branched-chain amino acid aminotransferase | |
| SACOL2070 | 2.1 | kdpD | Sensor histidine kinase | |
| SACOL2397 | 2.3 | nirD | Small subunit nitrite reductase | |
| SACOL0696 | 2.1 | tagB | Teichoic acid biosynthesis protein B | |
| SACOL0569 | 2.1 | ATP:guanido phosphotransferase family protein | ||
| SACOL1591 | 2.0 | Lipoate-protein ligase A family protein | ||
| SACOL2138 | 2.4 | Cation efflux family protein | ||
| SACOL2357 | 2.0 | ABC transporter, permease protein | ||
| SACOL2386 | 2.0 | narT/nirK | Nitrite extrusion protein | |
| SACOL2396 | 2.0 | Uroporphyrinogen III methylase, SirB, putative | ||
| N315-A1617 | 2.1 | Fragment, conserved hypothetical protein | ||
| SACOL0568 | 2.1 | Conserved hypothetical protein | ||
| SACOL1790 | 2.1 | Conserved hypothetical protein | ||
a
rbfΔ/wt data indicate the increased expression level in the wild type compared to the rbf deletion mutant. rbf++/wt data indicate the increased expression level in the Rbf-overproducing strain compared to the wild type.