TABLE 1.
Constraints per monomer (residues 11–56) | |
Unambiguous restraints | 1233 |
Ambiguous distance restraints | 803 |
Total number of distance restraintsa | 2036 |
Intra-residue |j-i| = 0 | 537 |
Sequential |j-i| = 1 | 404 |
Medium range 2 ≤ |j-i| < 4 | 370 |
Long range |j-i| ≥ 4 | 227 |
Inter-monomer | 498 |
Backbone dihedral ϕ angle restraints | 30 |
Total number of hydrogen bonds | 27 |
Inter-monomer hydrogen bonds | 4 |
Residual distance constraint violations | |
Number ≥ 0.3 Å | 0 |
Number ≥ 0.1 Å | 50 ± 2 |
Root mean square deviation from NOEs (Å) | 0.0205 ± 0.0001 |
Residual dihedral angle constraint violations | |
Number ≥ 5.0° | 4 |
Root mean square deviation from dihedrals (°) | 10.3 ± 0.0001 |
Energies (kcal/mol) | |
Total | −2870 ± 53 |
Van der Waals | −276 ± 9 |
Electrostatic | −3572 ± 87 |
Mean of pairwise root mean square deviation (Å) (13–56)b | |
Backbone atoms N, Ca, and C′ | 0.24 ± 0.06 |
Heavy atoms | 0.72 ± 0.07 |
Ensemble Ramachandran plot (13–56)b | |
Residues in most favored regions | 86.3% |
Additionally allowed | 12.4% |
Generously allowed | 1.2% |
Structure Z scores (13–56)b | |
Second generation packing quality | 3.9 ± 0.2 |
Ramachandran plot appearance | −4.4 ± 0.4 |
Chi1/Chi2 rotamer normality | −2.3 ± 0.2 |
Backbone conformation | −5.5 ± 1.2 |
Unsatisfied H-bond donors per dimerb | 1.2 |
Unsatisfied H-bond acceptors per dimerb | 0 |
Bumps per dimer (13–56)b | 12.1 |
a Distance constraints used for structure calculations, which excluded fixed intra-residue distances.
b Values for the structured region (between residues 13 and 56).