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. 2009 Jul 29;47(10):3289–3293. doi: 10.1128/JCM.00555-09

TABLE 1.

Bifidobacterium and A. omnicolens isolates used in this study, including the sites of isolation and the original identification of each before 16S rRNA gene sequencing

Isolate Original identification and method Clinical source GenBank accession no.
A. omnicolens Ref104 Unidentified GPRa (Gram stain and culture characteristics) Urine EU743947
A. omnicolens F1074 GPR most closely resembling Mobiluncus sp. (RapID ANA II code, 471771; API Coryne code, 0450721) Urine EU743948
A. omnicolens F2755 Variable GPR (Gram stain and culture characteristics; RapID ANA II code, 471771; API Coryne code, 0450721) Urine EU743949
A. omnicolens F2849 Lactobacillus sp. (Gram stain and culture characteristics; RapID ANA II code, 471771; API Coryne code, 0450721) Urine EU743950
A. omnicolens F3468 Unidentified GPR (Gram stain and culture characteristics) Urine EU743951
B. scardovii F3319 Actinomyces sp. (API Coryne strip code, not available) Urine EU743952
B. scardovii VAMC 6345 Unknown GPR resembling Actinomyces sp. (Gram stain and culture characteristics) Urine EU743953
B. scardovii S2870 A. israelii (Gram stain and culture characteristics) Cervix/uterus exudate EU743954
B. scardovii F961 Anaerobic GPR, not a known pathogen (Gram stain and culture characteristics; RapID ANA II code, 677673; API Coryne code, 6460361) Urine EU743955
B. longum F1519 Actinomyces sp., not A. israelii (RapID ANA II code, not available) Peritoneal wound EU743956
B. longum F492 Actinomyces sp., possibly A. israelii (RapID ANA II code, 425671; API Coryne code, 2450561) Appendix wound EU743957
B. breve S7365 Bifidobacterium sp. (RapID ANA II code, not available) Blood EU743958
B. breve VAMC11797 Actinomyces sp. (Gram stain and culture characteristics) Urine EU743959
B. breve 220119 S38 Actinomyces sp. (Gram stain and culture characteristics) Blood EU743960
B. breve TBAC519720 Unidentified microaerophilic GPR (Gram stain and culture characteristics) Blood EU743961
a

GPR, gram-positive rod.