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. 2009 Jun 28;8(10):2296–2307. doi: 10.1074/mcp.M800529-MCP200

Table III.

Classification result of the biomarker models in the validation set consisting of 40 blinded samples using the cutoff values obtained from the results of the complete cross-validation in the training set (0.2 for the SVM model and 4.8 for the linear model, respectively)

Given are the sample identification number (ID), the clinical diagnosis, and the classification result using the SVM model and the linear (Lin) model. Samples scoring positive for vasculitis in either model are indicated in bold; correct positive scores are labeled in bold italic. LN, lupus nephritis; MPGN, membranoproliferative glomerulonephritis; GS, glomerular sclerosis; NC, normal control.

Sample ID Diagnosis SVM model Lin model
21310 NC −2.168 −20.73
21092 MCD −2.147 −18.56
20915 FSGS −2.015 −17.19
21144 GS −1.938 −19.28
21309 LN −1.834 −18.78
21139 LN −1.798 −20.43
21312 MNGN −1.734 −9.24
20918 FSGS −1.682 −16.44
20970 FSGS −1.676 −10.20
21068 MNGN −1.599 −11.58
21224 AAV −1.528 −12.20
21279 FSGS −1.528 −10.39
20972 MPGN −1.493 −8.47
20980 MNGN −1.471 −12.53
21070 MNGN −1.45 −10.46
21313 MPGN −1.421 −5.75
20917 FSGS −1.366 −15.55
21287 MNGN −1.282 −16.22
21278 MNGN −1.27 −10.99
21482 FSGS −1.203 −9.84
21014 MNGN −1.195 −7.61
20903 MCD −0.818 −12.42
21157 MNGN −0.296 −0.55
21102 IgAN −0.292 −2.60
20971 MNGN 0.009 2.79
20976 LN 0.131 1.41
21217 GS 0.187 1.54
9619 AAV 0.259 11.14
21197 AAV 0.274 9.22
20933 IgAN 0.359 4.52
21311 AAV 0.903 8.70
21277 AAV 1.029 8.51
21065 IgAN 1.316 16.61
20932 LN 1.427 14.41
21195 IgAN 1.606 21.65
21192 AAV 2.153 22.29
21199 AAV 2.211 21.10
15701 AAV 2.225 21.81
21488 AAV 2.388 24.11
21143 AAV 2.58 29.97