Table 1.
Protein | Core TM sequence | Calculated hydrophobicity* | Predicted ΔG‡ |
---|---|---|---|
Synaptobrevin 2 | MMIILGVICAIILIIIIVYF | 64 | –3.80 |
RAMP4 | GPWLLALFIFVVCGSAIFQII | 41 | –1.27 |
Cytochrome b5 | WTNWVIPAISAVAVALMYRLYM | 25 | +0.20 |
The predicted ΔG provides an alternative indication of biological hydrophobicity (Hessa et al., 2007). The more negative the value, the more hydrophobic the TM segment shown