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. 2008 Jan 15;1:349–363.

Table 3.

The five significant clusters from nICA for the muscle regeneration data set (Positive Part).

Cluster ID GOID GO term p-value cluster frequency total frequency
2 7156 homophilic cell adhesion 1.56E-16 22/235 (9.3%) 142/15873 (0.8%)
16337 cell-cell adhesion 7.87E-12 22/235 (9.3%) 238/15873 (1.4%)
6 7399 nervous system development 1.34E-04 7/29 (24.1%) 651/15873 (4.1%)
30900 forebrain development 2.12E-04 3/29 (10.3%) 64/15873 (0.4%)
48731 system development 2.23E-04 7/29 (24.1%) 707/15873 (4.4%)
48856 anatomical structure development 4.11E-04 11/29 (37.9%) 1962/15873 (12.3%)
8 6886 intracellular protein transport 1.19E-04 10/81 (12.3%) 463/15873 (2.9%)
6091 generation of precursor metabolites and energy 1.82E-04 12/81 (14.8%) 688/15873 (4.3%)
11 6334 nucleosome assembly 7.26E-14 11/49 (22.4%) 121/15873 (0.7%)
31497 chromatin assembly 2.68E-13 11/49 (22.4%) 136/15873 (0.8%)
6325 establishment and/or maintenance of chromatin architecture 2.06E-09 11/49 (22.4%) 311/15873 (1.9%)
6461 protein complex assembly 2.43E-09 11/49 (22.4%) 316/15873 (1.9%)
6323 DNA packaging 2.77E-09 11/49 (22.4%) 320/15873 (2.0%)
7001 chromosome organization and biogenesis (sensu Eukaryota) 3.10E-08 11/49 (22.4%) 404/15873 (2.5%)
15 6092 main pathway of carbohydrate metabolism 4.99E-10 13/170 (7.6%) 120/15873 (0.7%)
6096 glycolysis 2.59E-09 10/170 (5.8%) 68/15873 (0.4%)
15980 energy derivation by oxidation of organic compounds 4.66E-09 14/170 (8.2%) 172/15873 (1.0%)
44265 cellular macromolecule catabolic process 1.42E-08 18/170 (10.5%) 327/15873 (2.0%)
46365 monosaccharide catabolic process 1.49E-08 10/170 (5.8%) 81/15873 (0.5%)
19320 hexose catabolic process 1.49E-08 10/170 (5.8%) 81/15873 (0.5%)
46164 alcohol catabolic process 1.89E-08 10/170 (5.8%) 83/15873 (0.5%)