Table 1.

Gene list of each cluster involved in Photosystem II

Cluster number	List of coexpressed genes
c′ 189	PsbO1–PsbR, PsbP1–PsbX, PsbY–PsbP1, PsbY–PsbX, PsbP1–PsbR, PsbY–PsbO1, PsbQ1–PsbTn
c′ 69	PsbY–PsbW, PsbQ-2–PsbTn, PsbQ1–PsbW, PsbY–PsbQ1, PsbTn–PsbX, PsbQ-2–PsbP1, PsbY–PsbTn, PsbO1–PsbO2, PsbP1–PsbW, PsbO1–PsbX, PsbQ1–PsbX, PsbO1–PsbQ2, PsbY–PsbQ2, PsbTn–PsbW
c′ 44	PsbR–PsbX, PsbX–PsbW, PsbQ2–PsbR, PsbO2–PsbR, PsbQ2–PsbX, PsbY–PsbR
c′ 78	PsbO-2–PsbX, PsbTn–PsbR, PsbR–PsbW, PsbO-1–PsbQ-1, PsbQ-1–PsbR, PsbO-1–PsbTn
c′ 7	PsbO2–PsbQ3.1, PPL1–PsbQ2, HCF136–PsbP1, PPL1–PsbW, PPL1–PsbP1, HCF136–PsbTn, PsbO1–PPL1, HCF136–PsbX, PPL1–PsbX, PsbP3–PsbQ3.2
c′ 40	PsbY–PPL2, HCF136–PPL2, PsbQ1–PsbQ3.1, PsbQ1–PPL2, PsbP3–PPL1, PsbTn–PPL2
c′ 34	PsbQ3.1–PsbX, PsbQ2–PPL2, PsbP1–PPL2, PsbX–PPL2, PsbO2–PPL2, PsbY–PsbQ3.1, PsbTn–PsbQ3.1, PsbQ-2–PsbQ3.1, PPL2–PsbW

Upper four and lower three clusters exhibit stable and fragile coexpressions, respectively. Underlined genes indicate those with fragile coexpression. c^′ indicates clusters obtained by rmsd <0.05.