Table 1.
Overview of data sets in Example 1 and 2
| Experiment | Genes | group A1 | group B |
| strong, 6 hours | 16539 | 4 (wild-type) | 4 (null) |
| intermediate, 6 hours | 16539 | 4 (wild-type) | 5 (null) |
| weak, 6 hours | 16539 | 5 (wild-type) | 5 (null) |
| strong, 5 days | 16539 | 4 (wild-type) | 4 (null) |
| weak, 5 days | 16539 | 4 (wild-type) | 4 (null) |
| Affymetrix | 45101 | 5 (wild-type) | 5 (transgenic) |
| Agilent | 41232 | 5 (wild-type) | 5 (transgenic) |
| Illumina | 46120 | 5 (wild-type) | 5 (transgenic) |
| home-spotted | 21771 | 5 (wild-type) | 5 (transgenic) |
| Solexa/Illumina | 34477 | 4 (wild-type) | 4 (transgenic) |
1 The sample size given refer to the number of biologically independent samples.