Skip to main content
. Author manuscript; available in PMC: 2010 Nov 24.
Published in final edited form as: Neuroscience. 2009 Jan 20;164(1):30–42. doi: 10.1016/j.neuroscience.2009.01.027

Table 2.

Web-applications developed to advance neuropsychiatric phenomics research

Application URL Description
PubGraph www.pubgraph.org Creates graphs of PubMed query results, where nodes are concepts defined by each query and edges are annotated with association statistics
PubBrain www.pubbrain.org Generates co-occurrence statistics of PubMed query with neuroanatomic lexicon, and projects weighted results on a 3D probabilistic atlas of the human brain
PubAtlas www.pubatlas.org Generates co-occurrence statistics among PubMed queries, generates heat maps and history plots, provides pre-defined lexica for “blast” queries relevant to neuropsychiatric phenomics research
Phenowiki www.phenowiki.org Provides wiki-like text annotation for cognitive concepts and tests, and collaborative database entry of quantitative effect size, heritability, psychometric, and sample statistics
Cognitive Atlas www.cognitiveatlas.org Provides collaborative annotation for cognitive concepts and tests, including specification of assertions with evidence for and evidence against, and confidence voting (under development)