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. Author manuscript; available in PMC: 2009 Oct 13.
Published in final edited form as: Biopolymers. 2008;90(3):369–383. doi: 10.1002/bip.20911

Table III.

Biological Activity of V13K Analogs Against Pseudomonas aeruginosa Strains

Hemolytic Activity
Antimicrobial Activity
Therapeutic Indexa
MIC (μg/ml)d
Peptide
Name
Number of
Positively
Charged
Residues
Number of
Negatively
Charged
Residues
Net
Charge
MHC
(μg/ml)b
Foldc PAO 1 PAK CP 204 PA 14 WR 5 M 2 GMg Folde MHC/MIC Foldf
V681 6 0 +6 7.8 0.03 15.6 31.3 15.6 62.5 62.5 15.6 27.8 1.8 0.3 0.06
−5 1 6 −5 >1000.0 8.0 >500.0 >500.0 >500.0 >500.0 >500.0 >500.0 1000.0 0.05 2.0 0.4
+1 7 6 +1 >1000.0 8.0 >500.0 >500.0 >500.0 >500.0 >500.0 >500.0 1000.0 0.05 2.0 0.4
+4S 4 0 +4 125.0 0.5 >500.0 >500.0 >500.0 >500.0 >500.0 >500.0 1000.0 0.05 0.1 0.02
+4E 7 3 +4 250.0 1.0 500.0 250.0 250.0 125.0 250.0 250.0 250.0 0.2 1.0 0.2
V13K 7 0 +7 250.0 1.0 31.3 125.0 7.8 62.5 250.0 31.3 49.6 1.0 5.0 1.0
+8 8 0 +8 250.0 1.0 31.3 62.5 7.8 31.3 62.5 31.3 31.3 1.6 8.0 1.6
+9 9 0 +9 <7.8 0.02 7.8 31.3 15.6 15.6 62.5 31.3 22.1 2.2 0.2 0.04
+10 10 0 +10 <7.8 0.02 15.6 15.6 7.8 15.6 31.3 31.3 17.5 2.8 0.2 0.04
a

Therapeutic index is the ratio of the MHC value (μg/ml) over the geometric mean MIC value (μg/ml). Large values indicate greater antimicrobial specificity.

b

MHC is the maximal peptide concentration that produces no hemolysis of human red blood cells after 18 h in the standard microtiter dilution method. When no detectable hemolytic activity was observed at 1000 μg/ml, a value of 2000 μg/ml was used for calculation of the therapeutic index and fold improvement. When hemolytic activity was still observed at 7.8 μg/ml, a value of 3.9 μg/ml was used for calculation of the therapeutic index and fold improvement.

c

The fold improvement in hemolytic activity compared to that of lead compound, V13K.

d

MIC is minimal inhibitory concentration that inhibited growth of six P. aeruginosa strains in brain heart infusion (BHI) medium at 37°C after 24 h. MIC is given based on three sets of determinations. When no detectable antimicrobial activity was observed at 500 μg/ml, a value of 1000 μg/ml was used for calculation of the therapeutic index and fold improvement. The relative susceptibilities of P. aeruginosa strains to ciprofloxacin, with the number 1 denoting the most susceptible strain, are as follows: PAOl, 4; WR5, 1; PAK, 4; PA14, 8; M2, 8; CP204, 64.

e

The fold improvement in antimicrobial activity (geometric mean data) compared to that of lead compound, V13K.

f

The fold improvement in therapeutic index compared to that of lead compound, V13K.

g

GM, geometric mean of the MICs for the six P. aeruginosa clinical isolates.