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. Author manuscript; available in PMC: 2009 Oct 13.
Published in final edited form as: Proteomics. 2009 Jun;9(11):3126–3135. doi: 10.1002/pmic.200800933

Table 1.

Results of B. cinerea proteins with signal P identified in all three growth conditions.

Gene Ida Putative Functionb Signal Pc PE pectin HE pectin sucrose

Scored Spectrae Scored Spectrae Scored Spectrae
BC1G_13137.1 Polygalacturonase 0.986Y 492.13 12 791.28 16 73.04 1
BC1G_00617.1 Pectin methylesterase 1.000Y 247.49 6 296.65 11 122.37 2
BC1G_06546.1 alpha-galactosidase precursor (Melibiase) 0.999Y 247.44 7 47.29 1 129.34 2
BC1G_07622.1 beta-glucosidase 0.995Y 523.25 13 396.44 5 461.52 11
BC1G_07319.1 1,3-beta glucanase 0.999Y 792.22 16 808.75 17 532.25 9
BC1G_10455.1 1,3-beta-glucanosyltransferase Gel1 0.998Y 254.54 4 172.44 3 263.19 10
BC1G_12859.1 alpha-glucosidase precursor 1.000Y 443.98 10 559.85 10 552.39 19
BC1G_04994.1 alpha-L-arabinofuranosidase 0.999Y 816.83 15 460.12 10 50.56 2
BC1G_08372.1 alpha-L-arabinofuranosidase A 0.995Y 100.63 2 336.39 4 102.4 1
BC1G_06328.1 alpha-L-rhamnosidase 0.992Y 218.77 6 265.45 5 231.9 6
BC1G_14030.1 beta-1-3-glucanosyltransferase 1.000Y 409.21 12 525.03 10 420.58 9
BC1G_10247.1 beta-fructofuranosidase 1.000Y 518.21 11 331.52 6 57.64 2
BC1G_03567.1 beta-galactosidase 0.998Y 792.51 17 309.73 6 266.3 6
BC1G_02364.1 beta-glucosidase 0.991Y 608.27 16 602.61 9 273.37 5
BC1G_10221.1 beta-glucosidase 1 precursor 0.816Y 1203.24 29 651.09 13 1544.26 48
BC1G_13690.1 Cell wall glycosyl hydrolase YteR, putative 0.998Y 243.78 4 495.08 13 110.69 3
BC1G_06509.1 Chitin binding protein 1.000Y 307.19 5 308.5 4 572.64 11
BC1G_00594.1 Endoglucanase 0.999Y 586.93 28 516.98 26 290.77 9
BC1G_13938.1 Exo-arabinanase 1.000Y 396.29 10 604.94 15 92.18 2
BC1G_01033.1 Exo-beta-1,3-glucanase 0.929Y 69.41 1 137.36 3 67.03 1
BC1G_01617.1 Exo-polygalacturonase 0.996Y 1098.98 29 833.38 33 116.36 2
BC1G_07215.1 Family 20 chitobiase 0.999Y 170.5 3 99.4 2 141.94 3
BC1G_11018.1 Family of alpha-1,6-mannanases 0.999Y 480.62 7 411.05 9 631.97 11
BC1G_00409.1 Glcosyl transferase/cell wall glucanase 1.000Y 347.29 6 271.42 7 246.29 4
BC1G_08755.1 Glucoamylase P precursor 0.997Y 359.15 7 126.38 2 366.87 6
BC1G_11898.1 Glucosidase 0.999Y 507.88 12 767.12 17 748.96 12
BC1G_12132.1 Glycosyl hydrolase family 65 protein 0.997Y 152.95 4 186.69 4 286.58 5
BC1G_09079.1 GPI-anchored cell wall beta-1,3-endoglucanase 0.999Y 664.29 12 621.5 13 588.23 9
BC1G_01204.1 Glyoxal oxidase 0.983Y 347.32 6 156.57 2 366.68 5
BC1G_00455.1 Mannosyl-oligosaccharide alpha-1,2-mannosidase precursor 0.998Y 1016.64 29 950.03 29 593.02 12
BC1G_02314.1 Extracellular phytase 0.995Y 460.62 12 230.08 4 427.18 14
BC1G_10486.1 Glutaminase GtaA 0.992Y 475.9 11 465.49 14 380.16 11
BC1G_11266.1 Laccase 0.999Y 550.72 17 418.69 14 565.69 16
BC1G_10329.1 Laccase 0.989Y 266.26 4 497.02 8 186.98 4
BC1G_11835.1 Phytase 0.978Y 84.38 1 61.01 3 191.12 4
BC1G_02965.1 Acid phosphatase/phosphoesterase 0.996Y 354.4 5 310.9 6 100.75 2
BC1G_02163.1 Ceratoplatanin 0.996Y 238.17 8 238.86 8 237.05 9
BC1G_07521.1 Aspartate protease 0.999Y 413.97 13 318.55 15 417.04 8
BC1G_03710.1 Carboxypeptidase S1 0.989Y 52.47 1 58.78 1 79.96 1
BC1G_01393.1 Hypothetical protein 1.000Y 461.2 14 486.53 14 510.93 9
BC1G_15201.1 Hypothetical protein 1.000Y 240.06 10 211.51 14 329.78 13
BC1G_12279.1 Hypothetical protein 1.000Y 41.65 1 47.4 1 66.02 3
BC1G_12374.1 Hypothetical protein 0.999Y 207.74 5 189.88 4 358.51 8
BC1G_08393.1 Hypothetical protein 0.999Y 150.34 3 258.01 3 155.89 3
BC1G_14136.1 Hypothetical protein 0.999Y 36.38 1 128.38 2 60.58 3
BC1G_11139.1 Hypothetical protein 0.999Y 61.09 2 72.08 3 72.26 1
BC1G_00198.1 Hypothetical protein 0.999Y 1004.38 21 736.07 15 1005.62 29
BC1G_08801.1 Hypothetical protein 0.982Y 199.37 5 86.34 1 51.09 1
BC1G_10095.1 Hypothetical protein 0.951Y 156.41 2 48.69 1 76.79 1
BC1G_13215.1 Hypothetical protein 0.820Y 144.78 2 113.98 1 122.66 2
a

Protein identification number provided by the broad institute B. cinerea BO5.10 database

b

Name/function was assigned based on sequence similarity when blasted using NCBI non redundant database

c

Signal P prediction value using algorithm SignalP3.0 server (http://www.cbs.dtu.dk/services/SignalP/)

d

Protein score calculated by adding individual non redundant peptide Mascot score over a threshold score at 1% False Discovery Rate as calculated by ProValT

e

Total number of spectra matched to proteins in all replicates in a growth condition of B. cinerea