Table 2.
Seed sequences used for BLAST searches
| Protein name | Molecular function | Seed from | Sequence IDa | Evidence |
|---|---|---|---|---|
| ACADV | Oxidation of very long chain fatty acid | Homo sapiens | P49748 | Experiment |
| ACADV2 | Homo sapiens | Q9H845 | Experiment | |
| ACADL | Oxidation of long chain fatty acid | Homo sapiens | P28330 | |
| Monosiga brevicollisa | gi|167537125 | BLAST and phylogeny | ||
| ACADM | Oxidation of medium chain fatty acid | Homo sapiens | P11310 | |
| Batrachochytrium dendrobatidisa | BDEG_05327 | BLAST and phylogeny | ||
| Monosiga brevicollisa | gi|167534479 | |||
| ACADS | Oxidation of short chain fatty acid | Homo sapiens | P16219 | |
| Monosiga brevicollisa | gi|167515960 | BLAST and phylogeny | ||
| ACDSB | Oxidation of isoleucine | Homo sapiens | P45954 | Experiment |
| Batrachochytrium dendrobatidisa | BDEG_04739 | BLAST and phylogeny | ||
| IVD | Oxidation of leucine | Homo sapiens | P26440 | Experiment |
| Batrachochytrium dendrobatidisa | BDEG_02262 | BLAST and phylogeny | ||
| Monosiga brevicollisa | gi|167524148 | |||
| GCDH | Oxidation of lysine and tryptophan | Homo sapiens | Q92947 | Experiment |
| Batrachochytrium dendrobatidisa | BDEG_05264 | BLAST and phylogeny | ||
| Monosiga brevicollisa | gi|167524186 | |||
| IBD | Oxidation of valine | Homo sapiens | Q9UKU7 | Experiment |
| Batrachochytrium dendrobatidisa | BDEG_03936 | BLAST and phylogeny | ||
| Monosiga brevicollisa | gi|167524677 | |||
| ACD10 | Function unknown | Homo sapiens | Q6JQN1 | cDNA |
| ACD11 | Function unknown | Homo sapiens | Q709F0 | cDNA |
| fadE | Oxidation of fatty acids of different chain length | Escherichia coli | Q47146 | Experiment |
| fadE12 | Oxidation of medium chain fatty acid | Mycobacterium tuberculosis | P71539 | Experiment |
aSeeds added in the second round of BLAST search.