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. 2009 Sep 7;3:89. doi: 10.1186/1752-0509-3-89

Table 3.

Execution times for the repressed bacterium operon model.

R M1 - SSA M2 - averaging + SSA M3 - averaging + SSA M4 - PDP ode23s M5 - PDP ode23s
50 7.4 103 2.9 103 1.4 102 1.1 104 6.7 101
100 6.8 103 6.9 102 3.5 101 3.7 103 3.6 101
200 5.4 103 1.7 102 1.3 101 1.6 103 1.9 101
300 4.9 103 8.1 101 7.6 8.0 102 1.4 101
2500 3.7 103 2.3 5.2 10-1 1.0 102 4.1
5000 3.6 103 8 10-1 1.3 10-1 4.7 101 2.9
10000 3.6 103 1 10-1 2.1 10-2 3.1 101 2.0

The time, expressed in [s] correspond to generating a 20 division cycles long trajectory (3.6 104s biological time) for models M1-M5. The values represent log-averages for 10 launches. Model M4 is obtained from M2 and model M5 is obtained from M3, via the Kramers-Moyal expansion.