Table 5.
Entire topology prediction results
| MT | PP | TH | HT | PH | MS | TP | |
| TMsingleAndSP | 97.2% | 94.0% | 75.5% | 47.5% | 79.1% | 72.7% | 7.1% |
| TMmultiAndSP | 84.1% | 81.0% | 52.4% | 57.1% | 47.6% | 65.1% | 3.2% |
| TMsingleNoSP | 81.0% | 65.8% | 68.8% | 73.4% | 69.6% | 79.3% | 53.6% |
| TMmultiNoSP | 66.1% | 63.7% | 51.4% | 65.7% | 45.7% | 67.4% | 37.2% |
| GLBandSP | 94.9% | 93.4% | 74.4% | 37.5% | 64.6% | 69.7% | 2.4% |
| GLBnoSP | 97.0% | 96.0% | 98.8% | 86.6% | 71.6% | 90.4% | 49.5% |
| Average | 86.7% | 82.3% | 70.2% | 61.3% | 63.0% | 74.1% | 25.5% |
| Average Rank | 1.3 | 3.2 | 3.8 | 4.5 | 5.0 | 3.2 | 7.0 |
The abbreviations are the same as described in Table 3. The prediction for globular proteins was counted as correct if no TM segment had been predicted, regardless of the N-terminal location prediction.