TABLE II.
Mean Jaccard Coefficient and Standard Error Computed for 21 Subcortical Labels Across Subjects in Intersubject Registration Experiment 1. We Include the Results of FLIRT (Affine), HAMMER, and CVS. Manual Segmentation Labels Are: Brain Stem (BrStem), Left and Right (L/R) Cerebral White Matter (CrWM), Cerebral Cortex (CrCtx), Lateral Ventricle (LtVent), Thalamus Proper (Thal), Caudate (Caud), Putamen (Put), Pallidum (Pall), Hippocampus (Hipp), Amygdala (Amyg). Statistically Significant Differences Between HAMMER and CVS Are Indicated by Bold Typesetting
| Label |
Affine (SE) |
HAMMER (SE) |
CVS (SE) |
|---|---|---|---|
| L-CrWM | 0.4622 (0.01) | 0.6830(0.01) | 0.8335 (0.00) |
| L-LtVent | 0.2927 (0.02) | 0.5936(0.02) | 0.6705 (0.01) |
| L-InfLtVent | 0.0417 (0.01) | 0.1194(0.01) | 0.1553 (0.01) |
| L-Thal | 0.6282 (0.02) | 0.7348(0.01) | 0.7514 (0.01) |
| L-Caud | 0.3916 (0.03) | 0.6777(0.01) | 0.6806 (0.02) |
| L-Put | 0.5716 (0.02) | 0.7095(0.01) | 0.7466 (0.01) |
| L-Pall | 0.4703 (0.02) | 0.5947(0.01) | 0.5894 (0.01) |
| ThVent | 0.3320 (0.02) | 0.4650(0.02) | 0.5441 (0.01) |
| FoVent | 0.3987 (0.02) | 0.6292(0.01) | 0.6993 (0.01) |
| BrStem | 0.6979 (0.01) | 0.7858(0.01) | 0.7338 (0.01) |
| L-Hipp | 0.3841 (0.02) | 0.5833(0.02) | 0.6201 (0.01) |
| L-Amyg | 0.3662 (0.03) | 0.6072(0.02) | 0.5537 (0.02) |
| R-CrWM | 0.4678 (0.01) | 0.6954(0.01) | 0.8301 (0.00) |
| R-LtVent | 0.2888 (0.02) | 0.5728(0.02) | 0.6589 (0.01) |
| R-InfLtVent | 0.0943 (0.01) | 0.2439(0.01) | 0.2532 (0.01) |
| R-Thal | 0.6492 (0.02) | 0.7496(0.01) | 0.7563 (0.01) |
| R-Caud | 0.3653 (0.04) | 0.6263(0.02) | 0.6595 (0.02) |
| R-Put | 0.5720 (0.02) | 0.7311(0.01) | 0.7515 (0.01) |
| R-Pall | 0.4541 (0.03) | 0.6062(0.01) | 0.6097 (0.01) |
| R-Hipp | 0.4724 (0.02) | 0.6505(0.01) | 0.6316 (0.01) |
| R-Amyg | 0.4627 (0.02) | 0.6194(0.01) | 0.5843 (0.02) |