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. Author manuscript; available in PMC: 2010 Dec 1.
Published in final edited form as: Neuroscience. 2009 Aug 28;164(2):478–487. doi: 10.1016/j.neuroscience.2009.08.049

Table 1.

Oligonucleotide primers

Gene Symbola Primer Pair (5 ′ to 3 ′) Product Size (bp)
For qualitative and real-time RT-PCR
Actb GGCTGTATTCCCCTCCATCG 154
CCAGTTGGTAACAATGCCATGT
Fzd1 GCGACGTACTGAGCGGAGTG 150
TGATGGTGCGGATGCGGAAG
Fzd2 CTCAAGGTGCCGTCCTATCTCAG 156
GCAGCACAACACCGACCATG
Fzd3 GGTGTCCCGTGGCCTGAAG 194
ACGTGCAGAAAGGAATAGCCAAG
Fzd4 GACAACTTTCACGCCGCTCATC 181
CCAGGCAAACCCAAATTCTCTCAG
Fzd5 AAGCTGCCTTCGGATGACTA 129
TGCACAAGTTGCTGAACTCC
Fzd6 TGTTGGTATCTCTGCGGTCTTCTG 110
CTCGGCGGCTCTCACTGATG
Fzd7 ATATCGCCTACAACCAGACCATCC 193
AAGGAACGGCACGGAGGAATG
Fzd8 GTTCAGTCATCAAGCAGCAAGGAG 122
AAGGCAGGCGACAACGACG
Fzd9 ATGAAGACGGGAGGCACCAATAC 107
TAGCAGACAATGACGCAGGTGG
Fzd10 ATCGGCACTTCCTTCATCCTGTC 199
TCTTCCAGTAGTCCATGTTGAG
Gapdh CCCCAATGTGTCCGTCGTG 84
GCCTGCTTCACCACCTTCT
Ncam1 CCCAGCCAAGGAGAAATCAG 123
CTGGTTTGGGCTCAGCTTCT
Ntrk2 CTGGGGCTTATGCCTGCTG 100
AGGCTCAGTACACCAAATCCTA
Ryk GGTCTTGATGCAGAGCTTTACT 170
CCCATAGCCACAAAGTTGTCTAC
Tbp CCCCACAACTCTTCCATTCT 103
GCAGGAGTGATAGGGGTCAT
For cloning partial cDNAs as riboprobe templates
Fzd1 CAGGTTCTGCAAAAGCTTCC 682
TCGGTTACTGCACTCCCTCT
Fzd2 TTTAAAAGCTGCCCTGTGCT 642
CTACCGGGAGAGAAGGGAAC
Fzd3 TTTGGGTTGGAAGCAAAAAG 616
GACACTCTGCCCAAGAAAGC
Fzd4 AATTCTAGGCAGCCCCTGTT 658
CCAGCATTCTGGAGGTTCAT
Fzd5 CACTCAAGACTCCGGAGAGG 607
TCCTGGGAGTGTAGGTTTGG
Fzd6 TTGCTAGCCCTGACTGTCCT 613
CTCCTTTTGGGGAAGGTAGG
Fzd7 TTTCAAGAGGAGGCCAAGAA 609
CCCTGTCTGGAGGAAAAACA
Fzd8 TGGCAGGACATGAGAAAGTG 682
CGGTTGTGCTGCTCATAGAA
Fzd9 AGTTTCCTCCTGACCGGTTT 692
CAAGGCCCTGAGCTTTACTG
Fzd10 CTTTGCTGCCTGTGCATAAA 616
CAATAAGCCCTCTGGTGCTC
Ryk GAACGACTTGCGAAGTGTCA 700
CAGAGTCATGAGCTCCCACA
a

Actb, actin, beta; Gapdh, glyceraldehyde-3-phosphate dehydrogenase; Ncam1, neural cell adhesion molecule 1; Ntrk2, neurotrophic tyrosine kinase, receptor, type 2; Tbp, TATA box binding protein.