Table 1.
Oligonucleotide primers
Gene Symbola | Primer Pair (5 ′ to 3 ′) | Product Size (bp) |
---|---|---|
For qualitative and real-time RT-PCR | ||
Actb | GGCTGTATTCCCCTCCATCG | 154 |
CCAGTTGGTAACAATGCCATGT | ||
Fzd1 | GCGACGTACTGAGCGGAGTG | 150 |
TGATGGTGCGGATGCGGAAG | ||
Fzd2 | CTCAAGGTGCCGTCCTATCTCAG | 156 |
GCAGCACAACACCGACCATG | ||
Fzd3 | GGTGTCCCGTGGCCTGAAG | 194 |
ACGTGCAGAAAGGAATAGCCAAG | ||
Fzd4 | GACAACTTTCACGCCGCTCATC | 181 |
CCAGGCAAACCCAAATTCTCTCAG | ||
Fzd5 | AAGCTGCCTTCGGATGACTA | 129 |
TGCACAAGTTGCTGAACTCC | ||
Fzd6 | TGTTGGTATCTCTGCGGTCTTCTG | 110 |
CTCGGCGGCTCTCACTGATG | ||
Fzd7 | ATATCGCCTACAACCAGACCATCC | 193 |
AAGGAACGGCACGGAGGAATG | ||
Fzd8 | GTTCAGTCATCAAGCAGCAAGGAG | 122 |
AAGGCAGGCGACAACGACG | ||
Fzd9 | ATGAAGACGGGAGGCACCAATAC | 107 |
TAGCAGACAATGACGCAGGTGG | ||
Fzd10 | ATCGGCACTTCCTTCATCCTGTC | 199 |
TCTTCCAGTAGTCCATGTTGAG | ||
Gapdh | CCCCAATGTGTCCGTCGTG | 84 |
GCCTGCTTCACCACCTTCT | ||
Ncam1 | CCCAGCCAAGGAGAAATCAG | 123 |
CTGGTTTGGGCTCAGCTTCT | ||
Ntrk2 | CTGGGGCTTATGCCTGCTG | 100 |
AGGCTCAGTACACCAAATCCTA | ||
Ryk | GGTCTTGATGCAGAGCTTTACT | 170 |
CCCATAGCCACAAAGTTGTCTAC | ||
Tbp | CCCCACAACTCTTCCATTCT | 103 |
GCAGGAGTGATAGGGGTCAT | ||
For cloning partial cDNAs as riboprobe templates | ||
Fzd1 | CAGGTTCTGCAAAAGCTTCC | 682 |
TCGGTTACTGCACTCCCTCT | ||
Fzd2 | TTTAAAAGCTGCCCTGTGCT | 642 |
CTACCGGGAGAGAAGGGAAC | ||
Fzd3 | TTTGGGTTGGAAGCAAAAAG | 616 |
GACACTCTGCCCAAGAAAGC | ||
Fzd4 | AATTCTAGGCAGCCCCTGTT | 658 |
CCAGCATTCTGGAGGTTCAT | ||
Fzd5 | CACTCAAGACTCCGGAGAGG | 607 |
TCCTGGGAGTGTAGGTTTGG | ||
Fzd6 | TTGCTAGCCCTGACTGTCCT | 613 |
CTCCTTTTGGGGAAGGTAGG | ||
Fzd7 | TTTCAAGAGGAGGCCAAGAA | 609 |
CCCTGTCTGGAGGAAAAACA | ||
Fzd8 | TGGCAGGACATGAGAAAGTG | 682 |
CGGTTGTGCTGCTCATAGAA | ||
Fzd9 | AGTTTCCTCCTGACCGGTTT | 692 |
CAAGGCCCTGAGCTTTACTG | ||
Fzd10 | CTTTGCTGCCTGTGCATAAA | 616 |
CAATAAGCCCTCTGGTGCTC | ||
Ryk | GAACGACTTGCGAAGTGTCA | 700 |
CAGAGTCATGAGCTCCCACA |
Actb, actin, beta; Gapdh, glyceraldehyde-3-phosphate dehydrogenase; Ncam1, neural cell adhesion molecule 1; Ntrk2, neurotrophic tyrosine kinase, receptor, type 2; Tbp, TATA box binding protein.