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. 2009 Apr;18(4):747–761. doi: 10.1002/pro.80

Figure 3.

Figure 3

Details of the interaction of trichothecene intermediate 15-decalonectrin with TRI3. (A) Stereoview of the electron density corresponding to 15-decalonectrin (dark gray) bound to TRI3 (white). The map, contoured at 3σ was calculated from coefficients of the form FoFc where the ligand was omitted from the phase calculation and refinement. Residues that interact with the epoxide moiety are depicted as sticks. Loop residues Lys424-Pro434, proposed to allow active site access are colored red. (B) Schematic representation of the interactions made by TRI3 with 15-decalonectrin. Polar and apolar interactions and distances in Å are indicated as red and gray dashes, respectively. Distance between the catalytic His186 and C15 Oxygen is not ideal for hydrogen bonding. (C) Coenzyme A binding site model. The proposed CoA binding site of TRI3 based on a structural superposition of the structure of FgTRI101 complexed with CoA and DON onto the structure of the TRI3·15-decalonectin complex is shown. TRI3 is colored white, FgTRI101 is colored light blue, CoA from the FgTRI101 structure is shown in stick representation, and 15-decalonectrin is depicted with spheres.