Skip to main content
. Author manuscript; available in PMC: 2010 Sep 7.
Published in final edited form as: J Theor Biol. 2009 May 31;260(1):110–120. doi: 10.1016/j.jtbi.2009.05.018

Table 5. Table of parameter values used during construction of the model.

Parameter* Units B1 B1opt B2 B2opt B3 B3opt
M0 nM 20 25 25 (6.7) - -
MY nM 1 0.42 0.42 0.094 0.094 0.034
MD nM 0.02 0.029 0.029 (0.12) - -
ρ dim' less 1 [1] 1 (11) - -
kMP_Y YT min-1 (1) (0.39) (0.39) 2.11 2.11 6.15
kM min-1 0 [0] 0 [0] 0 [0]
kM_D DT min-1 1 0.39 0.39 0.19 0.19 0.19
kD min-1 - - 0.25 0.49 0.49 0.45
kDP min-1 - - 0.0003 0.009 0.09 0.18
kDP_M nM-1 min-1 - - 0.01 0.073 0.73 0.64
kDS min-1 - - - - 10 [10]
kD_S min-1 - - - - 1 [1]
*

Values in square brackets [ ] are fixed during optimization. Values in parentheses ( ) are derived from the estimated and fixed parameters according to these definitions: ρ=kMP_YYTkM_DDT,M0=kDkDP_M,MD=kDPkDP_M,andMY=kYkYP_M