Table 1.
Gene(s) | Primer name | Sequence (5'-3') | Size (bp) | Tm (°C) | Reference |
---|---|---|---|---|---|
gyrB | gyr-320 | TAARTTYGAYGAYAACTCYTAYAAAGT | 970 | 50 | [63] |
rgyr-1260 | CMCCYTCCACCARGTAMAGTTC | [63] | |||
hrcN | hrcN-4r | CGAGCAGGAYTCGATGAACG | 250 | 50 | [57] |
hrcN-5rR | CCGGWYTGGTATTCACCCAG | [57] | |||
29-kbp GI | mutS-rev | CGCCATCGGGATCGGTTCGCC | 554 | 60 | This work |
narL-rev | GCCGTCTGGGCGCTGCAGAACG | This work | |||
paaABC | paaA-fw | CTCTTGCCAAAATGGATGGT | 2398 | 55 | This work |
paaC-rev | TTGCAAATTCTGCACTCTCG | This work | |||
pagRI | pagR-fw | GTGAAGGATACYTACTACAACG | 1206-29 | 55 | This work |
pagI-rev | CGAATGCATTGACGGCATGG | This work | |||
rrs | 16S-8F | AGAGTTTGATCCTGGCTCAG | 1503 | 48 | [64] |
16S-533R | TTACCGCGGCTGCTGGCAC | [64] | |||
16S-609R | ACTACYVGGGTATCTAAKCC | [65] | |||
16S-1492R | ACGGTTACCTTGTTACGACTT | [64] |
Tm = annealing temperature