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. 2009 Oct 10;6:164. doi: 10.1186/1743-422X-6-164

Table 2.

Sequence data for the regions predicted to have potential HLA binding peptides

HLA allele Anchor residue motif1 Predicted HLA binding regions
A*0201 .[AILTVM]...... [AILTVM] 395 codons

A*6801 [AILTVM]...... [RK]. 345 codons

B*2705 .[RK]...... [LFYRKHMI]. 148 codons

1 The anchor residue motifs were predicted from HLA-peptide structural conformations in PREDEP, residues in square brackets are the most preferred at the specific anchor site and the dots represent any other amino acid.