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. 2009 Sep 30;10:62. doi: 10.1186/1471-2156-10-62

Table 1.

Geographical and linguistic affiliations of populations sampled in this study, and allele frequencies in the studied populations

SNP No. rs1079597 rs1079598 rs2234690 rs1800498 rs1800497
SNP allele Aa Tb Tc Cd Te
RFLP TaqI B BclI MboI TaqI D TaqI A
Language family Population Geographical region Number of individuals allele 1 allele 1 allele 1 allele 2 allele 1
Northern Caucasian Adygeis (Shapsugs)f Russia, Krasnodar region 98 0.117 0.117 0.367 0.367 0.153
Indo-European Byelorussians 1g Belarus, Brest region, Pinsk 70 0.129 0.129 0.450 0.450 0.143
Byelorussians 2g Belarus, Minsk region, Mjadel' 75 0.113 0.113 0.487 0.487 0.120
Byelorussians 3g Belarus, Mogilev region, Klimovichi 85 0.153 0.153 0.400 0.400 0.165
Russians 1 Russia, Tver region, Andreapol' 109 0.252 0.252 0.463 0.463 0.261
Russians 2g Russia, Smolensk region, Sychevka 117 0.145 0.145 0.440 0.440 0.154
Russians 3g Russia, Kursk region, Ponyri 65 0.131 0.131 0.446 0.446 0.154
Russians 4h Russia, Ivanovo region, Puchezh 95 0.158 0.158 0.526 0.526 0.189
Russians 5g Russia, Archangelsk region, Oshevensk 71 0.211 0.211 0.577 0.577 0.232
Russians 6 Russia, Archangelsk region, Mezen' 147 0.153 0.153 0.554 0.554 0.156
Uralic Veps Russia, Vologda region, Babaevo 97 0.196 0.196 0.500 0.500 0.180
Komi 1 (Izhemski)i Russia, Komi Republic, Izhma 112 0.138 0.138 0.411 0.411 0.152
Komi 2 (Priluzski)i Russia, Komi Republic, Obyachevo 109 0.206 0.206 0.482 0.482 0.225
Khantsj Russia, Khanty-Mansi autonomous region 62 0.234 0.234 0.750 0.750 0.258
Nenets Russia, Yamalo-Nenetsky autonomous region 65 0.223 0.223 0.762 0.762 0.262
Altaic Yakutsg Russia, Saha Republic, Tiungiuliu 118 0.269 0.269 0.932 0.932 0.214
Kalmyksg Russia, Republic Kalmykiya, Elista 104 0.356 0.356 0.856 0.856 0.346

SNP accession numbers and corresponding RFLPs names are presented for the polymorphisms studied. Alleles without restriction sites are named "allele 1", alleles with restriction sites "allele 2".

a only A and G were detected at this SNP locus in a sample of 2450 chromosomes from 17 populations http://www.hapmap.org, http://www.ncbi.nlm.nih.gov/SNP

b only T and C were detected at this SNP locus in a sample of 1204 chromosomes from 14 populations http://www.ncbi.nlm.nih.gov/SNP

c only A and T were detected at this SNP locus in a sample of 142 chromosomes from three populations http://www.ncbi.nlm.nih.gov/SNP

d only T and C were detected at this SNP locus in a sample of 946 chromosomes from 12 populations http://www.ncbi.nlm.nih.gov/SNP

e only T and C were detected at this SNP locus in a sample of 2628 chromosomes from 21 populations http://www.hapmap.org, http://www.ncbi.nlm.nih.gov/SNP

f population initially described in [62]

g population initially described in [38]

h population initially described in [37]

i population initially described in [53]

j population initially described in [39]