Skip to main content
. Author manuscript; available in PMC: 2010 Apr 5.
Published in final edited form as: Prog Nucl Magn Reson Spectrosc. 2009 Apr 5;54(3-4):141–165. doi: 10.1016/j.pnmrs.2008.06.002

Table 1.

Validation of the early empirical correlation methods

Protein Name a PDB b SSC (method 1) b SSC (method 2) b SSC (PROMOTIF)

α % β % α % β % α % β %
Acyl Carrier Protein 1ACP 61 0 68 5 52 0
α Purothionin 2PLH 35 22 31 26 40 13
BPTI 1PIT 26 36 24 44 19 21
Calmodulin 1A29 62 8 58 10 59 3
Cytochrome C 1AKK 49 6 57 7 38 0
E. Coli Thioredoxin 1XOA 40 31 38 29 36 26
HEW Lysozyme 1E8L 45 19 35 29 35 0
Human Thioredoxin 1AIU 42 34 41 32 41 28
Insulin 9INS 58 10 67 12 48 0
Parvalbumin 3PAT 64 6 67 5 51 4
Ribonuclease A 1A2W 22 48 19 51 20 35
Staph. Nuclease 1JOR 30 38 36 36 28 17
a

PDB: RCSB code of the protein

b

SSC: Secondary structure calculated using method 1 [13], method 2 [152] or PROMOTIF [52]

HHS Vulnerability Disclosure