TABLE 1.
Comparative sequence analysis between the wheat genomic shotgun sequences from the BAC clones 317L24 (ctg: 19, 20, 09) and 2163O14 (ctg: 46, 101) and the rice genome sequence
| Sequence name | BAC clone | GenBank acc. no. | Size (bp) | TIGR gene | Rice chr. | Expect | Identity (%) | Annotation TIGR v.6 |
|---|---|---|---|---|---|---|---|---|
| Ctg19 | 317L24 | FJ666343 | 4484 | Os12g44150 | 12 | 1.5e-255 | 70 | Plasma membrane ATPase1 |
| Ctg20 | 317L24 | FJ666341 | 7208 | Os12g44160 | 12 | 8.0e-124 | 79 | Oxidoreductase |
| Ctg09 | 317L24 | FJ666346 | 1448 | Os12g44170 | 12 | 5.7e-163 | 82 | Pentatricopeptide |
| Ctg46 | 2163O14 | GQ219778 | 1293 | Os01g14180 | 1 | 2.1e-11 | 76 | Expressed protein |
| Ctg101 | 2163O14 | GQ219777 | 3091 | Os02g13990 | 2 | 1.5e-40 | 66 | U2 small nuclear ribonucleoprotein A |