Table 1.
Thermodynamic Parameters of Duplex Formation for R5a Labeled CS Duplexes
labeled position | ΔH°b (kcal/mol) | ΔS°b (cal/(mol·K)) | ΔG°37°cc (kcal/mol) | ΔΔG°37°cd (kcal/mol) |
---|---|---|---|---|
(A) Wild-Type CS Duplexa | ||||
none | −69 ± 2 | −192 ± 8 | −9.4 | |
CS7 | −68 ± 5 | −191 ± 17 | −9.2 | 0.2 |
CS9 | −63 ± 5 | −174 ± 15 | −8.8 | 0.6 |
CS12 | −67 ± 2 | −186 ± 7 | −9.2 | 0.2 |
CS14 | −64 ± 2 | −176 ± 5 | −9.1 | 0.3 |
(B) Mutant CS Duplexe | ||||
none | −75 ± 3 | −214 ± 8 | −9.1 | |
CS2_1A | −80 ± 1 | −227 ± 5 | −9.4 | −0.3 |
CS24_12T | −78 ± 3 | −222 ± 9 | −9.0 | 0.1 |
DNA sequence as shown in Figure 1A.
Averages and errors were obtained based on results from multiple sets of melting measurements.
ΔG°37°C = ΔH° − 310 K × ΔS°. Averages of ΔG°37°C value from multiple melting measurements are reported, with errors estimated to be less than ± 0.1 kcal/mol.
ΔΔG°37°C = ΔG°37°C (labeled) − ΔG°37°C (unlabeled).
DNA sequence modified at the duplex terminus: C1/G24 to A1/T24.