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. 2009 Jul 24;26(11):2499–2513. doi: 10.1093/molbev/msp166

Table 4.

Summary of MK Tests

Fixed Differences between Clades A & B Polymorphic Sites within Clade A G-Test Resultsa NIb
AvrP123 Synonymous 19 2 G = 15.57 10.92
Nonsynonymous 47 54 P = <0.001
AvrP4c Synonymous 17 2 G = 4.55 4.50
Nonsynonymous 34 18 P = 0.033
a

Probability determined by a G-test.

b

NI refers to the NI (Rand and Kann 1996).

c

The calculation of fixed differences between clades A and B for AvrP4 were performed using only the single clade B haplotype Lm-12 (see Materials and Methods).