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. Author manuscript; available in PMC: 2010 Aug 1.
Published in final edited form as: J Chem Inf Model. 2009 Aug;49(8):1963–1973. doi: 10.1021/ci900144x

Table 1.

Experimental binding affinities (IC50) of the isatin sulfonamide analogues to caspase-3 used in this study. All values represent the average (± standard error) of multiple determinations as reported in literature.10, 11

Ligand R1 R2 R3 IC50 (nM)
graphic file with name nihms133539f8.jpg
Region I: Pyrrolidine analogues
1 graphic file with name nihms133539t1.jpg —CH3 =O 119.2 ± 17.0
2 graphic file with name nihms133539t2.jpg —H =O 240.0 ± 10.0
3 graphic file with name nihms133539t3.jpg graphic file with name nihms133539t4.jpg =O 12.2 ± 0.3
4 graphic file with name nihms133539t5.jpg graphic file with name nihms133539t6.jpg =O 14.5 ± 1.6
5 graphic file with name nihms133539t7.jpg graphic file with name nihms133539t8.jpg =O 12.1 ± 2.1
6 graphic file with name nihms133539t9.jpg graphic file with name nihms133539t10.jpg =O 12.4 ± 2.1
7 graphic file with name nihms133539t11.jpg graphic file with name nihms133539t12.jpg =O 12.0 ± 1.5
8 graphic file with name nihms133539t13.jpg graphic file with name nihms133539t14.jpg =O 13.5 ± 2.4
9 graphic file with name nihms133539t15.jpg graphic file with name nihms133539t16.jpg =O 9.85 ± 0.9
10 graphic file with name nihms133539t17.jpg graphic file with name nihms133539t18.jpg =O 10.3 ± 1.5
11 graphic file with name nihms133539t19.jpg graphic file with name nihms133539t20.jpg =O 21.3 ± 3.2
12 graphic file with name nihms133539t21.jpg graphic file with name nihms133539t22.jpg =O 9.1 ± 1.8
13 graphic file with name nihms133539t23.jpg graphic file with name nihms133539t24.jpg =O 9.7 ± 1.3
14 graphic file with name nihms133539t25.jpg —H =O 58.3 ± 7.6
15 graphic file with name nihms133539t26.jpg —CH3 =O 23.3 ± 3.1
16 graphic file with name nihms133539t27.jpg graphic file with name nihms133539t28.jpg =O 5.2 ± 1.6
17 graphic file with name nihms133539t29.jpg graphic file with name nihms133539t30.jpg =O 3.9 ± 0.9
18 graphic file with name nihms133539t31.jpg graphic file with name nihms133539t32.jpg =O 4.4 ± 1.4
19 graphic file with name nihms133539t33.jpg graphic file with name nihms133539t34.jpg =O 8.4 ± 2.0
20 graphic file with name nihms133539t35.jpg graphic file with name nihms133539t36.jpg =O 3.9 ± 0.6
21 graphic file with name nihms133539t37.jpg graphic file with name nihms133539t38.jpg =O 3.6 ± 0.5
22 graphic file with name nihms133539t39.jpg —H =O 20.4 ± 1.7
23 graphic file with name nihms133539t40.jpg —H graphic file with name nihms133539t41.jpg 272 ± 24.7
24 graphic file with name nihms133539t42.jpg —CH3 graphic file with name nihms133539t43.jpg 119.3 ± 4.0
25 graphic file with name nihms133539t44.jpg graphic file with name nihms133539t45.jpg graphic file with name nihms133539t46.jpg 27.8 ± 2.5
26 graphic file with name nihms133539t47.jpg graphic file with name nihms133539t48.jpg graphic file with name nihms133539t49.jpg 31.8 ± 6.2
27 graphic file with name nihms133539t50.jpg graphic file with name nihms133539t51.jpg graphic file with name nihms133539t52.jpg 20.1 ± 1.3
28 graphic file with name nihms133539t53.jpg graphic file with name nihms133539t54.jpg graphic file with name nihms133539t55.jpg 7.6 ± 1.1
29 graphic file with name nihms133539t56.jpg graphic file with name nihms133539t57.jpg graphic file with name nihms133539t58.jpg 7.8 ± 1.9
30 graphic file with name nihms133539t59.jpg graphic file with name nihms133539t60.jpg graphic file with name nihms133539t61.jpg 5.1 ± 0.7
31 graphic file with name nihms133539t62.jpg graphic file with name nihms133539t63.jpg graphic file with name nihms133539t64.jpg 7.8 ± 1.5
Region I: Azetidine analogues
32 graphic file with name nihms133539t65.jpg —H =O 286.7 ± 24.7
33 graphic file with name nihms133539t66.jpg —CH3 =O 91.7 ± 7.6
34 graphic file with name nihms133539t67.jpg graphic file with name nihms133539t68.jpg =O 9.7 ± 1.6
35 graphic file with name nihms133539t69.jpg graphic file with name nihms133539t70.jpg =O 8.4 ± 1.2
36 graphic file with name nihms133539t71.jpg graphic file with name nihms133539t72.jpg =O 11.3 ± 1.2
37 graphic file with name nihms133539t73.jpg graphic file with name nihms133539t74.jpg =O 8.8 ± 1.4
38 graphic file with name nihms133539t75.jpg graphic file with name nihms133539t76.jpg =O 9.4 ± 0.3
39 graphic file with name nihms133539t77.jpg graphic file with name nihms133539t78.jpg =O 10.9 ± 1.4
40 graphic file with name nihms133539t79.jpg graphic file with name nihms133539t80.jpg =O 29.2 ± 5.2
41 graphic file with name nihms133539t81.jpg graphic file with name nihms133539t82.jpg =O 5.8 ± 1.0
Region I: Miscellaneous rings
42 graphic file with name nihms133539t83.jpg graphic file with name nihms133539t84.jpg =O 1430 ± 40
43 graphic file with name nihms133539t85.jpg graphic file with name nihms133539t86.jpg =O 1028 ± 259
44 graphic file with name nihms133539t87.jpg graphic file with name nihms133539t88.jpg graphic file with name nihms133539t89.jpg 583 ± 68
45 graphic file with name nihms133539t90.jpg graphic file with name nihms133539t91.jpg graphic file with name nihms133539t92.jpg 1405 ± 219
46 graphic file with name nihms133539t93.jpg graphic file with name nihms133539t94.jpg graphic file with name nihms133539t95.jpg 529 ± 69.3
47 graphic file with name nihms133539t96.jpg graphic file with name nihms133539t97.jpg graphic file with name nihms133539t98.jpg 4700 ± 700
48 graphic file with name nihms133539t99.jpg graphic file with name nihms133539t100.jpg graphic file with name nihms133539t101.jpg 4633 ± 1000
49 graphic file with name nihms133539t102.jpg graphic file with name nihms133539t103.jpg graphic file with name nihms133539t104.jpg 1550 ± 70.0
50 graphic file with name nihms133539t105.jpg graphic file with name nihms133539t106.jpg graphic file with name nihms133539t107.jpg 1454 ± 170
51 graphic file with name nihms133539t108.jpg graphic file with name nihms133539t109.jpg graphic file with name nihms133539t110.jpg 1672 ± 348
52 graphic file with name nihms133539t111.jpg graphic file with name nihms133539t112.jpg graphic file with name nihms133539t113.jpg 1993 ± 86
53 graphic file with name nihms133539t114.jpg graphic file with name nihms133539t115.jpg =O 114.2 ± 30.4
54 graphic file with name nihms133539t116.jpg graphic file with name nihms133539t117.jpg graphic file with name nihms133539t118.jpg 323 ± 15.6
55 graphic file with name nihms133539t119.jpg graphic file with name nihms133539t120.jpg graphic file with name nihms133539t121.jpg 718 ± 216
56 graphic file with name nihms133539t122.jpg graphic file with name nihms133539t123.jpg graphic file with name nihms133539t124.jpg 365 ± 48.8
57 graphic file with name nihms133539t125.jpg graphic file with name nihms133539t126.jpg graphic file with name nihms133539t127.jpg 671 ± 107
58 graphic file with name nihms133539t128.jpg graphic file with name nihms133539t129.jpg graphic file with name nihms133539t130.jpg 673 ± 31.8
59 graphic file with name nihms133539t131.jpg graphic file with name nihms133539t132.jpg graphic file with name nihms133539t133.jpg 724 ± 151