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. Author manuscript; available in PMC: 2010 Aug 1.
Published in final edited form as: J Chem Inf Model. 2009 Aug;49(8):1963–1973. doi: 10.1021/ci900144x

Table 3.

Predicted affinities of the test set utilizing the CoMFA and three CoMSIA models.

Ligand Exp.a pIC50 CoMFA CoMSIA1 CoMSIA2 CoMSIA3

Pred.b Resi.c Pred. Resi. Pred. Resi. Pred. Resi.
2 6.620 6.680 0.060 6.701 0.081 6.762 0.142 6.440 −0.180
5 7.917 7.831 −0.086 7.961 0.044 7.813 −0.104 7.820 −0.097
8 7.870 7.870 0.000 8.003 0.133 7.806 −0.064 7.486 −0.384
18 8.357 8.389 0.032 8.362 0.005 8.401 0.044 8.317 −0.040
22 7.690 6.805 −0.885 7.062 −0.628 6.890 −0.800 6.723 −0.967
24 6.923 6.882 −0.041 6.742 −0.181 7.014 0.091 7.247 0.324
26 7.498 7.551 0.053 7.636 0.138 7.632 0.134 7.378 −0.120
30 8.292 8.173 −0.119 8.206 −0.086 8.265 −0.027 8.342 0.050
33 7.038 7.155 0.117 6.949 −0.089 7.135 0.097 7.361 0.323
40 7.535 7.920 0.385 7.906 0.371 7.848 0.313 7.776 0.241
45 5.852 5.947 0.095 5.748 −0.104 6.123 0.271 6.069 0.217
48 5.334 5.814 0.480 5.665 0.331 5.658 0.324 5.530 0.196
52 5.700 5.948 0.248 5.936 0.236 6.095 0.395 6.233 0.533
53 6.942 6.568 −0.374 6.538 −0.404 6.395 −0.547 6.916 −0.026
58 6.172 6.162 −0.010 6.145 −0.027 6.175 0.003 6.190 0.018
a

Exp. refers to experimentally measured IC50.

b

Pred. refers to predicted IC50.

c

Resi. refers to the corresponding difference between the predicted and measured IC50.