Table 3. Smallest Overlapping Region of LOH and Amplification.
| Chr | Region | Start | End | Size (Mb) | Genes |
|---|---|---|---|---|---|
| LOH | |||||
| 1 | p36.22-p36.32 | 2934387 | 7714998 | 4.5 | TP73 & 43 others |
| 2 | p12 | 76540993 | 77901722 | 1.4 | LOC647278, LRRTM4 |
| 4 | q34.3-q35.1 | 182024320 | 182669289 | 0.64 | LOC728081 |
| 4 | q28.3 | 132654783 | 133220977 | 0.57 | LOC646187 |
| 6 | q14.3-q15 | 87409153 | 88149210 | 0.74 | 11 genes |
| 8 | p12 | 32284018 | 32576053 | 0.29 | NRG1 |
| 9 | p21.3 | 19969813 | 24005138 | 4.3 | p16 and 38 others |
| 9 | p23 | 9622921 | 9710279 | 0.087 | |
| 10 | q26.13-q26.2 | 127094126 | 127623699 | 0.53 | MMP21, UROS, & 7 others |
| 13 | q14.3 | 49429768 | 50000059 | 0.57 | RFP2 and 8 others |
| Amplification | |||||
| 1 | q32.1 | 202184808 | 203378384 | 1.2 | MDM4 and 17 others |
| 5 | p15.33 | 1105360 | 2131006 | 1.0 | hTERT and 15 others |
| 5 | q35.3 | 178877013 | 179301287 | 0.42 | SQSTM1 and 14 others |