Table 4. Two most frequent EPIYA segmentsa.
Segment | Ratio | |
AC | KELNAKLGNFNNNNNNGLKN..EPIYAKVNKKK | 53/272 |
AC | KELNAKLGNFNNNNNNGLKNSTEPIYAKVNKKK | 22/272 |
AD | KELNEKLFGNSNNNNNGLKNNTEPIYAQVNKKK | 53/272 |
AD | XXXXXKLFGNSNNNNNGLKNNTEPIYAQVNKKK | 22/272 |
BC | TGQVASPEEPIYAQVAKKVNAKIDRLNQIASGLGGVGQAAG | 25/262 |
BC | AGQAASPEEPIYAQVAKKVNAKIDRLNQIASGLGGVGQAAG | 19/262 |
BD | TGQATSPEEPIYAQVAKKVSAKIDQLNEATS | 25/262 |
BD | TGQVASPEEPIYAQVAKKVSAKIDQLNEATS | 19/262 |
C | FPLKRHDKVDDLSKVGRSVSPEPIYATIDDLGGP | 144/343 |
C | FPLKRHDKVDDLSKVGRAVSPEPIYATIDDLGGP | 50/343 |
D | AINRKIDRINKIASAGKGVGGFSGAGRSASPEPIYATIDFDEAN | 144/343 |
D | AINRKIDRINKIASAGKGVGGFSGAGRSASPEPIYATIDFDETN | 50/343 |
X represents unknown amino acids; the amino acids which are different in two sequences shown are highlighted; Ratio = (Frequency of the type)/(Total frequency).