Table 2. Efficiency of the three methods tested for KRAS mutation analysis on FFPE-DNA samples from the diagnostic group A and the unfavorable control group B.
eligible | informative | |||
KRAS-TMGB | 210 | 209 | 99,5% | |
group A | 135 | 135 | 100% | |
group B | 75 | 74 | 98,7% | |
fragmentation (≤200 bp) | 108 | 107 | 99,1% | |
Cycle sequencing | 129/210* | 61,5% | 111/210 | 52,8% |
group A | 129/135 | 95,5% | 111/135 | 82,2% |
group B | 0/75 | na | na | |
fragmentation (≤200 bp) | 7/108 | 6,5% | 2/108 | 1,9% |
Therascreen KRAS | 95 | 65 | 68,4% | |
group A | 29 | 28 | 96,6% | |
group B | 66 | 37 | 56,1% | |
fragmentation (≤200 bp) | 81 | 51 | 62,9% |
* = samples were eligible for sequencing when the corresponding PCR product was visualized upon agarose gel electrophoresis.
na = not applicable.