Table 2.
The ten transcription factors with the most regulatory effects (highest outgoing connectivity)
| Transcription factor | Outgoing connectivity | Gene annotation | GO pathways (level 5) |
| At4g17695 | 1254 | KAN3 (KANDI 3) | Transcription; regulation of cellular metabolic process |
| At1g77200 | 1103 | AP2 | Transcription; regulation of cellular metabolic process; RNA metabolic process |
| At2g17040 | 1100 | ANAC036 (Arabidopsis NAC domain containing protein 36) | Transcription; regulation of cellular metabolic process; RNA metabolic process |
| At5g16560 | 1100 | KAN | Reproductive structure development; regionalization; organ development; cell fate commitment |
| At2g47900 | 971 | AtTLP3 (tubby like protein 3) | Transcription; regulation of cellular metabolic process |
| At2g28700 | 921 | AGL46 | Transcription; regulation of cellular metabolic process; RNA metabolic process |
| At5g07690 | 850 | MYB29 (myb domain protein 29) | Transcription; response to gibberellin stimulus; regulation of cellular metabolic process; RNA metabolic process |
| At4g14920 | 846 | PHD finger | Transcription; regulation of cellular metabolic process; RNA metabolic process |
| At3g23240 | 816 | ATERF1/ERF1 (ethylene response factor 1) | Response to ethylene stimulus; transcription; regulation of cellular metabolic process; intracellular signaling cascade; two-component signal transduction system; RNA metabolic process |
| At3g30210 | 721 | MYB121 (myb domain protein 121) | Response to abscisic acid stimulus; transcription; regulation of cellular metabolic process; RNA metabolic process |