Table 2.
Eleven snoRNAs with intergenic loci
| Ggn_ID | GenBank_ID | Annotation | Reads_no | Length | Sequences |
|---|---|---|---|---|---|
| Ggn29 | EU240247 | ENSGALT00000042330 :SCARNA3 | 1 | 143 | CTGGAAGCTGTTGGGACCAGTTGGGACCGGTGGTGGGCAA AACAAGTGTTTTGTCCACTCTTGCAGTCTTCCTAGAGT AAAGTGGAGGTCTCTGTCTGCTTTAGGAGAGCCAACT AAACTGGATCGTTCCCCTCCATACATGT |
| Ggn119a | EU240332 | RF01225:ACA64 | 1 | 134 | TTGGCACAGTCTGAAAATCACCTGCGGTCTCCCGTGGCCCC CGGTGAGATAACCGTGCCGACAGCATAGGGAACATCA AAGCTTATTGCCCACGGTGACAGTGTGTGGGGAGTGA AACCCGTGTTCCCATAACC |
| Ggn38 | EU240255 | ENSGALT00000042195 :SNORD100 | 1 | 72 | ATGAAAATTTGGCTCCCTCTACTGAAACAAATGAGGAGAAC TGCCTTAATCGTTACCCAAATCTTCTGAGAT |
| Ggn11 | EU240230 | Predicted CD box snoRNA | 2 | 85 | TGCTCAATGATGATCATCCTCCTTTGATTACCTGGTGAGGT AATATGAGAGGACATGGAATAATTTCACCGGCGAAC TGAGAGCA |
| Ggn138 | EU240346 | Predicted CD box snoRNA | 1 | 58 | AGTGCAGTGATCATAAACCAAAGCTGAACATGGAGCTCAGT GTGGTTTATTGTAGAGG |
| Ggn20 | EU240238 | Predicted CD box snoRNA | 1 | 61 | GCTGGTGATGAGATAGTTATCCCTGTCCGAAACGTTCCTCTG TGGAAGCGTGACTCTGAGG |
| Ggn37 | EU240254 | Predicted CD box snoRNA | 1 | 70 | CGTCCGATGATGAACCTCAATGCTGTTCACATCCTGACACGC CGTGACGAGCGCTGTCGAGCTGAGGACG |
| Ggn86 | EU240302 | Predicted CD box snoRNA | 9 | 96 | CGATCCTTCCGGTTCATAGCAAATGATGAATGGGAGTTGCAC GCGGCTGCGTGACGTGTGCGCCCTTTGTTACGACGTGC ACAGCCCCTTCTGAGC |
| Ggn58 | EU240274 | Predicted HACA box snoRNA | 11 | 134 | CATGCCCCAGTCGTGTTGCAGATATGGCTGTAGTGCCATGTT TGTGTCATTAGGTGGCAGAAAGGAAAAGGCTGTGTCTT TGCTAATGCTCTGAAACCGGTGAGCACTCAGGAATGAC TAGCAACCTGACAAAT |
| Ggn87 | EU240303 | Predicted HACA box snoRNA | 3 | 130 | CTGCATGTTAATCCAAGAGCTGTGGCTCTGACGTAGCTGC AGGTCTCCAACAACATGCAAGAGCAACGGGAAGGTCT TTGACTGCTCGGCCTCTTCTGCCTGTTGCTGTCACTCAC CCCTCCTATATATT |
| Ggn126 | EU240339 | Predicted HACA box snoRNA | 1 | 123 | GGCTCGCGCAATTCCAAACCTGACAGTGGTTCTGGTTTGCT GTCAGCCTCATAGAGCAAAAGCGAGGGTTTATTCACT GAAAAGGTGAAGCCGTTTCCTTTTTTCCTTGCCTCCC TCACACTC |
aIndependently predicted by Qu’s group (23).