Skip to main content
. Author manuscript; available in PMC: 2009 Oct 31.
Published in final edited form as: J Inorg Biochem. 2007 Aug 25;102(2):216–233. doi: 10.1016/j.jinorgbio.2007.08.002

Table 1.

Statistics of X-Ray data collection and refinement

MnIIIMb(H2O) MnIIIMb(ONO) CoIIIMb(H2O) CoIIIMb(ONO) MnIIMb MnIIMb(NO) MnIIIMb(MeOH) MnIIIMb(N3)
PDB code 2O58 2O5O 2O5T 2O5S 2O5B 2O5Q 2O5L 2O5M
Data collection a
Space group P21 P21 P21 P21 P21 P21 P21 P21
Cell Dimen.
a (Å) 35.41 35.43 35.31 35.17 35.21 35.47 35.41 35.48
b (Å) 28.65 28.67 28.75 28.68 28.74 28.64 28.59 28.75
c (Å) 62.94 62.99 63.03 63.36 64.20 63.19 63.20 62.91
 β (°) 106.0 105.5 106.5 106.1 105.45 105.7 105.74 105.9
Resolution (Å) 1.65 1.60 1.60 1.60 2.00 1.90 1.70 1.65
Mean I/σ(I) 15.2 (4.4) 14.5 (4.0) 10.1 (2.9) 20.4 (4.7) 9 (2.7) 9.0 (2.5) 12.5 (3.9) 17.0 (4.6)
No. Reflections
 Observed 63842 68845 64903 65732 25281 35301 58562 64306
 Unique 14874 16177 15721 15758 8510 9669 13275 14301
Comp. (%) 99.6 (98.2) 98.5 (95.9) 96.2 (87.2) 96.5 (86.6) 98.7 (96.0) 97.8 (99.9) 96.8 (93.7) 95.3 (91.0)
Rmerge (%)b 5.6 (26.4) 5.3 (31.6) 7.7 (34.8) 4.4 (16.8) 7.6 (31.8) 9.5 (23.6) 6.8 (36.4) 5.1 (27.2)
Refinement
 Res. Range (Å) 19.47-1.65 25.92-1.60 26.51-1.60 26.58-1.60 20.63-2.00 26.57-1.90 21.91-1.70 26.75-1.65
R-factor (%)c 17.9 18.6 19.3 17.4 19.4 17.7 17.4 18.4
Rfree (%)d 22.3 22.4 24.8 21.5 23.9 21.8 23.3 22.1
 rmsd bond dist. 0.015 0.013 0.017 0.012 0.023 0.021 0.014 0.015
 rmsd angles (°) 1.57 2.26 2.47 2.28 2.05 2.49 1.53 2.29
B factor (Å2)
 Mean 17.6 16.88 21.59 15.36 32.12 22.02 18.17 16.2
 rmsd main 0.82 0.81 0.85 0.77 1.15 1.05 0.86 0.81
 rmsd side 2.4 2.27 2.49 2.37 3.06 2.80 2.48 2.34
a

Values in parentheses correspond to the highest resolution shells for MnIIIMb(H2O) (1.71–1.65 Å), MnIIIMb(ONO) (1.66–1.60 Å), CoIIIMb(H2O) (1.66–1.60 Å), CoIIIMb(ONO) (1.66–1.60 Å), MnIIMb (2.07-2.00), MnIIMb(NO) (1.97–1.90 Å), MnIIIMb(MeOH) (1.76–1.70 Å), and MnIIIMb(N3-) (1.71–1.65 Å).

b

Rmerge =Σ|I - <I>|/Σ(I) where I is the individual intensity observation and <I> is the mean of all measurements of I.

c

R-factor = Σ‖Fo| - |Fc‖/Σ|Fo| where Fo and Fc are the observed and calculated structure factors, respectively.

d

Rfree is calculated using randomly selected reflections comprising 5% of the data not used throughout refinement.