Table 3.
Marker information
No. | rs number | Alias | Base | Chromsome Position | Map Position |
---|---|---|---|---|---|
1 | rs2619538 | P42111, A | T/A | 15773188 | Promoter |
2 | rs12204704 | B | C/T | 15773184 | Promoter |
3 | rs2743852 | C | C/G | 15772743 | Promoter |
4 | rs2619537 | D | C/T | 15772392 | Promoter |
5 | rs909706 | P1583,E | C/T | 15768850 | intron1 |
6 | rs1997679 | P1795 | C/T | 15766884 | intron1 |
7 | rs1474605 | P1792 | A/G | 15766191 | intron1 |
8 | rs1018381 | P1578 | C/T | 15765049 | intron1 |
9 | rs2619522 | P1763 | A/C | 15761628 | intron1 |
10 | rs760761 | P1320 | C/T | 15759111 | intron3 |
11 | rs2005976 | P1757 | G/A | 15758781 | intron3 |
12 | rs2619528 | P1765 | G/A | 15757808 | intron3 |
13 | rs2619550 | F′ | C/G | 15742221 | intron4 |
14 | rs1011313 | P1325 | C/T | 15741411 | intron4 |
15 | rs2619542 | E′ | C/T | 15737202 | intron4 |
16 | rs13198195 | F | T/C | 15736802 | intron4 |
17 | rs13198335 | G | A/G | 15736727 | intron4 |
18 | N/A | H | C/T | 15736141 | intron4 |
19 | rs3213207 | P1635 | A/G | 15736081 | intron4 |
20 | rs12527496 | I | C/T | 15736060 | intron4 |
21 | rs12525702 | J | G/A | 15735750 | intron4 |
22 | rs16876738 | K | G/C | 15735532 | intron5 |
23 | rs2619539 | P1655 | C/G | 15728834 | intron5 |
24 | rs3829893 | P31701,L | C/T | 15723616 | intron5 |
25 | rs760666 | P1287 | C/T | 15697100 | intron7 |
26 | rs12524251 | M | C/T | 15694111 | intron7 |
27 | rs742105 | P1333 | C/T | 15681053 | intron7 |
28 | N/A | N | G/- | 15658414 | intron7 |
29 | N/A | O | A/G | 15632897 | intron8 |
30 | rs742106 | P1328 | C/T | 15632459 | intron9 |
31 | rs1047631 | P32301,A′,P | A/G | 15631080 | 3′UTR |
The markers in different haplotype blocks are separated by “__” in the first column. Base, major allele/minor allele;
Weickert et al. 2004; A–P, markers names by Williams et al. 2004; A′, E′ and F′, markers named by Morris et al. 2003. The six bolded markers were genotyped in the present study. The marker numbers are consistent with Figure 1 and Table 2. N/A, not applicable due to unknown.