Table 1.
Known cell cycle sites (lines 1–6; from ref. 8) and some metabolic sites (lines 7–12; from ref. 1) that match words from our genomewide dictionary
| Name | Consensus sequence | Dictionary words |
|---|---|---|
| MCB | ACGCGT | AAACGCGTACGCGTCGCGT CGCGACGCGT TGACGCGT |
| SCB | CRCGAAA | ACGCGAAA |
| SCB′ | ACRMSAAA | ACGCGAAAACGCCAAA AACGCCAA |
| Swi5 | RRCCAGCR | GCCAGCG GCAGCCAG |
| SIC1 | GCSCRGC | GCCCAGCC CCGCGCGG |
| MCM1 | TTWCCYAAWNNGGWAA | TTTCCNNNNNNGGAAA |
| NIT | GATAAT | TGATAATG |
| MET | TCACGTG | RTCACGTGTCACGTGM CACGTGAC CACGTGCT |
| PDR | TCCGCGGA | TCCGCGG |
| HAP | CCAAY | AACCCAAC |
| MIG1 | KANWWWWATSYGGGGW | TATATGTGCATATATGGTGGGGAG |
| GAL4 | CGGN11CCG | CGGN11CCG |
The strings in the dictionary words that match the consensus sequence are underlined.