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. Author manuscript; available in PMC: 2010 Nov 1.
Published in final edited form as: Pharmacol Biochem Behav. 2009 Aug 8;94(1):131–147. doi: 10.1016/j.pbb.2009.07.019

Table 2.

Gene Ontology (GO) categories, with names and identification numbers, displaying significant over-representation of genes, and the respective gene names and their symbols

GO Category/GOBPID Genes Symbol
blood vessel development/GO:0001568 angiopoietin-like 4 Angptl4
B-cell translocation gene 1, anti-proliferative Btg1
connective tissue growth factor Ctgf
endothelial-specific receptor tyrosine kinase Tek
forkhead box O1A Foxo1a
gap junction membrane channel protein alpha 1 Gja1
neurotrophic tyrosine kinase, receptor, type 2 Ntrk2
phosphatidic acid phosphatase type 2B Ppap2b
protein O-fucosyltransferase 1 Pofut1
secretogranin 2 Scg2
small inducible cytokine subfamily E, member 1 Scye1
transforming growth factor alpha Tgfa
tyrosine kinase with immunoglobulin-like and EGF-like domains 1 Tie1
regionalization/GO:0003002 activity regulated cytoskeleton-associated protein Arc
B-cell translocation gene 2, anti-proliferative Btg2
E1A binding protein p300 Ep300
Huntington disease gene homolog Hdh
lymphoid enhancer binding factor 1 Lef1
protein O-fucosyltransferase 1 Pofut1
ring finger protein 2 Rnf2
negative regulation of protein kinase activity/GO:0006469 caveolin Cav
dual specificity phosphatase 6 Dusp6
protein kinase inhibitor beta, cAMP dependent, catalytic Pkib
regulator of G-protein signalling 3 Rgs3
sprouty homolog 2 Spry2
isoprenoid metabolic process/GO:0006720 3-hydroxy-3-methylglutaryl-coenzyme A reductase Hmgcr
dehydrogenase/reductase (SDR family) member 3 Dhrs3
isopentenyl-diphosphate delta isomerase notch1-induced protein phytn-dehydro and Pyr-redox domain containing protein Idi1
one-carbon compound metabolic process/GO:0006730 B-cell translocation gene 1, anti-proliferative Btg1
carbonic anhydrase 11 Car11
FBJ murine osteosarcoma viral oncogene homolog Fos
isoprenylcysteine carboxyl methyltransferase Icmt
methionine adenosyltransferase II, alpha Mat2a
methyl-CpG binding domain protein 1 Mbd1
protein tyrosine phosphatase, receptor type, G Ptprg
anti-apoptosis/GO:0006916 a disintegrin and metalloproteinase domain 17 Adam17
FGF receptor activating protein 1 Frag1
Forkhead box O1A Foxo1a
heat shock 70kDa protein 5 (glucose-regulated protein) Hspa5
hormone-regulated proliferation associated protein 20 Hrpap20
Huntington disease gene homolog Hdh
superoxide dismutase 2, mitochondrial Sod2
transforming growth factor alpha Tgfa
TSC22 domain family 3 Tsc22d3
zinc finger protein 91 Zfp91
microtubule-based movement/GO:0007018 actin-related protein 10 homolog Actr10
Huntington disease gene homolog Hdh
kinesin family member 1B Kif1b
kinesin family member 6 Kif6
kinesin family member 11 Kif11
kinesin heavy chain family, member 2 Kif2
kinesin light chain 1 Klc1
tubulin, beta 2b Tubb2b
gamete generation/GO:0007276 3-hydroxy-3-methylglutaryl-coenzyme A reductase Hmgcr
a disintegrin-like and metallopeptidse with thrombospondin type 1 motif, 1 Adamts1
B-cell translocation gene 1, anti-proliferative Btg1
carnitine deficiency-associated gene expressed in ventricle 1 Cdv1
dead end homolog 1 Dnd1
heat shock factor 2 Hsf2
hydroxyacyl glutathione hydrolase Hagh
kinesin family member 6 Kif6
McKusick-Kaufman syndrome protein Mkks
nitric oxide synthase 3, endothelial cell Nos3
seven in absentia 1A Siah1a
zinc finger protein 403 Zfp403
gastrulation/GO:0007369 camello-like 3 Cml3
Huntington disease gene homolog Hdh
nuclear receptor subfamily 4, group A, member 3 Nr4a3
phosphatidic acid phosphatase type 2B Ppap2b
ring finger protein 2 Rnf2
heart development/GO:0007507 E1A binding protein p300 Ep300
endothelial-specific receptor tyrosine kinase Tek
gap junction membrane channel protein alpha 1 Gja1
histone deacetylase 5 Hdac5
McKusick-Kaufman syndrome protein Mkks
plakophilin 2 Pkp2
protein O-fucosyltransferase 1 Pofut1
transforming growth factor, beta receptor 3 Tgfbr3
regulation of G-protein coupled receptor protein signaling/GO:0008277 endothelin converting enzyme 1 Ece1
phospholipase C, epsilon 1 Plce1
RAS guanyl releasing protein 4 Rasgrp4
receptor (calcitonin) activity modifying protein 2 Ramp2
regulator of G-protein signaling 3 Rgs3
regulator of G-protein signaling 9 Rgs9
protein catabolic process/GO:0030163 calpastatin Cast
gap junction membrane channel protein alpha 1 Gja1
prenylcysteine oxidase 1 Pcyox1
proteasome (prosome, macropain) 26S subunit, ATPase, 6 Psmc6
proteasome (prosome, macropain) 26S subunit, non-ATPase, 12 Psmd12
proteasome (prosome, macropain) subunit, alpha type 4 Psma4
seven in absentia 1A Siah1a
seven in absentia 2 Siah2
ubiquitin associated domain containing 1 Ubadc1
ubiquitin carboxyl-terminal hydrolase L5 Uchl5
ubiquitin-conjugating enzyme E2D 3 Ube2d3
protein modification by small protein conjugation/GO:0032446 calcyclin binding protein Cacybp
LIM domain only protein 7 Lmo7
retinoblastoma binding protein 6 Rbbp6
ring finger protein 2 Rnf2
seven in absentia 1A Siah1a
seven in absentia 2 Siah2
ubiquitin associated domain containing 1 Ubadc1
negative regulation of programmed cell death/GO:0043069 a disintegrin and metalloproteinase domain 17 Adam17
angiopoietin-like 4 Angptl4
B-cell translocation gene 2, anti-proliferative Btg2
FGF receptor activating protein 1 Frag1
Forkhead box O1A Foxo1a
heat shock 70kDa protein 5 (glucose-regulated protein) Hspa5
hormone-regulated proliferation associated protein 20 Hrpap20
Huntington disease gene homolog Hdh
secretogranin 2 Scg2
superoxide dismutase 2, mitochondrial Sod2
transforming growth factor alpha Tgfa
TSC22 domain family 3 Tsc22d3
zinc finger protein 91 Zfp91
regulation of MAPK activity/GO:0043405 caveolin Cav
cholinergic receptor, nicotinic, alpha polypeptide 7 Chrna7
dual specificity phosphatase 6 Dusp6
phospholipase C, epsilon 1 Plce1
regulator of G-protein signaling 3 Rgs3
sprouty homolog 2 Spry2
transforming growth factor alpha Tgfa
biopolymer methylation/GO:0043414 B-cell translocation gene 1, anti-proliferative Btg1
B-cell translocation gene 2, anti-proliferative Btg2
FBJ murine osteosarcoma viral oncogene homolog Fos
isoprenylcysteine carboxyl methyltransferase Icmt
methyl-CpG binding domain protein 1 Mbd1
regulation of kinase activity/GO:0043549 caveolin Cav
cell division cycle 42 homolog Cdc42
cholinergic receptor, nicotinic, alpha polypeptide 7 Chrna7
diacylglycerol kinase, alpha Dgka
dual specificity phosphatase 6 Dusp6
phospholipase C, epsilon 1 Plce1
protein kinase inhibitor beta, cAMP dependent, catalytic Pkib
regulator of G-protein signaling 3 Rgs3
speedy homolog 1 Spdy1
sprouty homolog 2 Spry2
transforming growth factor alpha Tgfa
cell maturation/GO:0048469 actin, alpha 1, skeletal muscle Acta1
calpastatin Cast
gap junction membrane channel protein alpha 1 Gja1
growth differentiation factor 11 Gdf11
hairy and enhancer of split 1 Hes1
parathyroid hormone receptor 1 Pthr1
anatomical structure formation/GO:0051603 angiopoietin-like 4 Angptl4
B-cell translocation gene 1, anti-proliferative Btg1
connective tissue growth factor Ctgf
endothelial-specific receptor tyrosine kinase Tek
Huntington disease gene homolog Hdh
nuclear receptor subfamily 4, group A, member 3 Nr4a3
protein O-fucosyltransferase 1 Pofut1
secretogranin 2 Scg2
small inducible cytokine subfamily E, member 1 Scye1
transforming growth factor alpha Tgfa
tyrosine kinase with immunoglobulin-like and EGF-like domains 1 Tie1