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. 2009 Sep 18;191(22):7001–7006. doi: 10.1128/JB.01002-09

TABLE 1.

Oligodeoxynucleotides used to change specific codons in the tnaC genes examined in this study

tnaC source Change Oligodeoxynucleotide sequence
Proteus vulgaris K33R 5′-CGCCTTCTTCTTTCCTCGTAAATAATCCCTTTTCTATAC-3′
5′-GTATAGAAAAGGGATTATTTACGAGGAAAGAAGAAGGCG-3′
K33I 5′-CGCCTTCTTCTTTCCTATAAAATAATCCCTTTTC-3
5′-GAAAAGGGATTATTTTATAGGAAAGAAGAAGGCG-3′
K33R-K34R 5′-CGCCTTCTTCTTTCCTCGTCGTTAATCCCTTTTCTATAC-3′
5′-GTATAGAAAAGGGATTAACGACGAGGAAAGAAGAAGGCG-3′
K33I-K34I 5′-CGCCTTCTTCTTTCCTATAATATAATCCCTTTTCTATAC-3′
5′-GTATAGAAAAGGGATTATATTATAGGAAAGAAGAAGGCG-3′
ΔK33-34 5′-CGCCTTCTTCTTTCCTTAATCCCTTTTCTATAC-3′
5′-GTATAGAAAAGGGATTAAGGAAAGAAGAAGGCG-3′
TAA35TGA 5′-CTTCTTCTTTCCTAAAAAATGATCCCTTTTCTATACATATC-3′
5′-GATATGTATAGAAAAGGGATCATTTTTTAGGAAAGAAGAAG-3′
W20R 5′-CGTCAGATTGAAGAAACGGTTTAATATTGA-3′
5′-GAGTCAATATTAAACCGTTTCTTCAATCTGACG-3′
D24A 5′-GAAATGGTTTAATATTGCCTCTGAACTCGCCTTC-3′
5′-GAAGGCGAGTTCAGAGGCAATATTAAACCATTTC-3′
L27A 5′-ATATTGACTCTGAAGCCGCCTTCTTCTTTCC-3′
5′-GGAAAGAAGAAGGCGGCTTCAGAGTCAATAT-3′
P32A 5′-GAACTCGCCTTCTTCTTTCCTAAAAAATAATCCCTTTTC-3′
5′-GAAAAGGGATTATTTTTTAGGAAAGAAGAAGGCGAGTTC-3′
Escherichia coli W12R 5′-GTGTGACCTCAAAATGGTTCAATATTGACAAC-3′
5′-GTTGTCAATATTGAACCATTTTGAGGTCACAC-3′
D16A 5′-CTCAAAATGGTTCAATATTGCCAACAAAATTGTCGATCACC-3′
5′-GGTGATCGACAATTTTGTTGGCAATATTGAACCATTTTGAG-3′
P24A 5′-GTCGATCACCGCGCTTGATTTGCCTTC-3′
5′-GAAGGCAAATCAAGCGCGGTGATCGAC-3′