TABLE 1.
Top 20 genes with the K4me3 decreasing and transcriptional downregulation in the absence of MII1
Gene | Product or other description | Expression level |
ChIP-chip peak score (log2) | ChIP-qPCR fold change (log2) | ||
---|---|---|---|---|---|---|
MII1−/−/MII1+/+ (log2) | P value | Adjusted P value | ||||
Thbd | Thrombomodulin | −11.10 | 5.70E−05 | 1.39E−03 | −4.75 | −6.18 |
Kctd12b | Potassium channel tetramerization domain containing 12b | −8.08 | 5.86E−03 | 2.26E−02 | −3.86 | −5.46 |
Hoxc9 | Homeobox C9 | −6.53 | 7.14E−08 | 3.67E−04 | −4.25 | −6.04 |
Rspo2 | R-Spondin 2 homolog (Xenopus laevis) | −6.52 | 4.64E−07 | 3.67E−04 | −4.10 | −1.37 |
Mgp | Matrix Gla protein | −6.50 | 5.69E−06 | 5.00E−04 | −4.09 | −6.25 |
Bnc1 | Basonuclin 1 | −8.28 | 1.91E−04 | 2.61E−03 | −2.10 | |
Plek | Pleckstrin | −5.74 | 1.21E−06 | 3.67E−04 | −4.41 | −6.09 |
Tcf2 | HNF1 homeobox B | −4.59 | 7.09E−06 | 5.43E−04 | −5.28 | −6.27 |
C4bp | Complement component 4 binding protein | −6.88 | 3.60E−07 | 3.67E−04 | −2.99 | |
Pax9 | Paired box gene 9 | −6.42 | 1.36E−07 | 3.67E−04 | −3.43 | −5.03 |
9030425E11Rik | RIKEN cDNA 9030425E11 gene | −7.63 | 1.18E−07 | 3.67E−04 | −2.16 | |
II20ra | Interleukin 20 receptor alpha | −6.57 | 1.01E−06 | 3.67E−04 | −3.20 | −4.78 |
Abi3bp | ABI gene family, member 3 (NESH) binding protein | −7.06 | 6.97E−03 | 2.56E−02 | −2.56 | |
Dkk3 | Dickkopf homolog 3 (Xenopus laevis) | −5.95 | 4.85E−06 | 4.81E−04 | −3.49 | −5.80 |
Mafb | v-maf musculoaponeurotic fibrosarcoma oncogene family, protein B (avian) | −6.37 | 5.14E−06 | 4.85E−04 | −3.01 | |
Ebf3 | Early B-cell factor 3 | −5.10 | 5.32E−02 | 1.11E−01 | −4.26 | −5.52 |
Tgfbi | Transforming growth factor, beta induced | −5.85 | 8.74E−07 | 3.67E−04 | −3.51 | −4.27 |
Pitx2 | Paired-like homeodomain transcription factor 2 | −6.83 | 6.69E−03 | 2.49E−02 | −2.23 | |
Sfrp1 | Secreted frizzled-related protein 1 | −5.18 | 1.18E−03 | 7.62E−03 | −3.79 | |
Enpp3 | Ectonucleotide pyrophosphatase/phosphodiesterase 3 | −6.62 | 8.58E−03 | 2.96E−02 | −2.30 |