TABLE 1.
Strain group | Strain | MAT type | Descriptiona | Transposition at 24°Cb | cDNAc |
---|---|---|---|---|---|
Wild type | SWY2283 | a | wt | +++ | 1.0 |
SWY2284 | α | wt | +++ | 1.0 | |
Single FxF(G) and GLFG deletion mutants | SWY2801 | α | nup1ΔFxFG | +++ | ND |
SWY2731 | a | nup2ΔFxFG | +++ | 0.4 | |
SWY2772 | a | nup60ΔFxF | +++ | ND | |
SWY2922 | a | nsp1ΔFGΔFxFG | +++ | 1.0 | |
SWY2825 | a | nup49ΔGLFG | ++ | 0.8 | |
SWY2869 | a | nup145ΔGLFG | ++ | 0.4 | |
SWY2754 | a | nup57ΔGLFG | ++++ | 0.6 | |
SWY2764 | a | nup100ΔGLFG | ++++ | 0.5 | |
SWY2789 | a | nup116ΔGLFG | +++ | 4.2/1.7** | |
Double GLFG deletion mutants | SWY2882 | a | nup49ΔGLFG nup57ΔGLFG | ++ | 1.2 |
SWY2916 | a | nup116ΔGLFG nup145ΔGLFG | + | 1.6/2.5** | |
SWY2819 | a | nup116ΔGLFG nup57ΔGLFG | +++* | 1.7/2.2** | |
SWY2841 | a | nup116ΔGLFG nup49ΔGLFG | + | 1.7 | |
SWY2973 | a | nup100ΔGLFG nup145ΔGLFG | ++ | 0.5 | |
SWY2785 | a | nup100ΔGLFG nup57ΔGLFG | +++ | 0.5 | |
SWY2835 | a | nup100ΔGLFG nup49ΔGLFG | ++ | ND | |
SWY2924 | a | nup145ΔGLFG nup57ΔGLFG | ++ | 0.7 | |
Triple symmetric deletion mutants | SWY2968 | a | nup100ΔGLFG nup145ΔGLFG nup49ΔGLFG | − | 5.3*** |
SWY2951 | a | nup100ΔGLFG nup145ΔGLFG nup57ΔGLFG | + | 1.3 | |
SWY2953 | α | nup100ΔGLFG nup145ΔGLFG nup57ΔGLFG | + | 1.3 | |
SWY3012 | a | nup100ΔGLFG nup57ΔGLFG nsp1ΔFGΔFxFG | + | 1.5 | |
SWY2980 | a | nup100ΔGLFG nup145ΔGLFG nsp1ΔFGΔFxFG | ++ | 1.8 | |
Asymmetric mutants | SWY2844 | a | ΔC | +++ | 0.5 |
SWY2852 | α | ΔC nsp1ΔFG | ++++ | 1.8*** | |
SWY2897 | α | ΔN | ++ | 0.4 | |
SWY2905 | α | ΔN nsp1ΔFxFG | +++ | 0.7/1.2** | |
SWY3062 | a | ΔNΔC nsp1ΔFGΔFxFG | ++ | 1.26 | |
SWY3063 | α | ΔNΔC nsp1ΔFGΔFxFG | + | 0.9*** | |
SWY2971 | α | ΔNΔC | ++ | 0.2 | |
Asymmetric + GLFG deletions | SWY3462 | a | ΔNΔC nup145ΔGLFG | ++ | 0.3 |
SWY3410 | α | ΔNΔC nup57ΔGLFG | +++ | 0.7 | |
SWY3930 | a | ΔNΔC nup57ΔGLFG | +++ | 1.4 | |
SWY3043 | a | ΔNΔC nup100ΔGLFG | +++ | 0.3 | |
Slow-growing strains | SWY2965 | a | nup145ΔGLFG nup49ΔGLFG | ND | 0.5 |
SWY2871 | a | nup100ΔGLFG nup49ΔGLFG nup57ΔGLFG | ND | 1.2 | |
SWY3008 | a | nup100ΔGLFG nup49ΔGLFG nsp1ΔFGΔFxFG | ND | No cDNA | |
SWY3603 | α | ΔNΔC nup116ΔGLFG | ND | No cDNA |
ΔC, Nup42ΔFG Nup159ΔFG; ΔN, Nup1ΔFxFG Nup2ΔFxFG Nup60ΔFxF.
Cells that had undergone transposition formed papillations on selective medium, and the phenotype was scored for three to four transformants for each mutant (+ to ++++; − indicates no papillations). *, results shown are for three of four transformants tested (reduced for one of four).
For cDNA analysis, two transformants were tested unless stated otherwise. The cDNA-to-plasmid ratio was quantified using Quantity One software (Bio-Rad, Hercules, CA) and was normalized to the ratio for the wt, which was designated as 1. One of the two transformants is shown if the difference between levels of cDNA compared to wt was less than 0.2. **, results shown are for two transformants with a cDNA difference of more than 0.2; ***, only one transformant was tested; ND, not determined.